Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_F04
(866 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 445 e-125
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 445 e-125
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 445 e-125
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 445 e-125
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 442 e-124
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 440 e-123
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 436 e-122
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 432 e-121
sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1)... 432 e-121
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 431 e-120
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 445 bits (1145), Expect = e-125
Identities = 232/279 (83%), Positives = 235/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
LDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKS
Sbjct: 326 LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 445 bits (1145), Expect = e-125
Identities = 232/279 (83%), Positives = 235/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
LDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKS
Sbjct: 326 LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 445 bits (1145), Expect = e-125
Identities = 232/279 (83%), Positives = 235/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDISDNKRAVRRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKHKKDISDNKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
+DK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKS
Sbjct: 326 MDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 445 bits (1145), Expect = e-125
Identities = 232/279 (83%), Positives = 235/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
LDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKS
Sbjct: 326 LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 442 bits (1136), Expect = e-124
Identities = 229/279 (82%), Positives = 235/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRK+KKDISDNKRAVRRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISDNKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
+DK +HDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKS
Sbjct: 326 MDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 440 bits (1131), Expect = e-123
Identities = 230/279 (82%), Positives = 233/279 (83%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKR KKDIS+NKRAVRRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRNDKKDISENKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
LDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKS
Sbjct: 326 LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 436 bits (1120), Expect = e-122
Identities = 223/279 (79%), Positives = 235/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF+QEFKRK+KKD++ NKRA+RRLRT
Sbjct: 206 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA+IEIDSL+EGIDFYTSITRARFEELNADLFRST+EPVEK+LRDAK
Sbjct: 266 ACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
+DK IHDIVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE IL GDKS
Sbjct: 326 MDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMT LIKRN YSDNQPGVLIQV+EG
Sbjct: 386 EEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANG 484
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 432 bits (1112), Expect = e-121
Identities = 220/279 (78%), Positives = 237/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVK+TAGDTHLGGEDFDNR+V+HF++EFKRKHKKDIS NKRA+RRLRT
Sbjct: 208 DVSILTIEDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRALRRLRT 267
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK
Sbjct: 268 ACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAK 327
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
+DK IHD+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKS
Sbjct: 328 MDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKS 387
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD GIETAGGVMTALIKRN YSDNQPGV+IQVYEG
Sbjct: 388 ENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEG 447
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANG
Sbjct: 448 ERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANG 486
>sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1) (HSP70-1/HSP70-2)
Length = 641
Score = 432 bits (1110), Expect = e-121
Identities = 220/279 (78%), Positives = 236/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNHF++EFKRKHKKDIS NKRAVRRLRT
Sbjct: 206 DVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRT 265
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS QA++EIDSL+EGIDFYTSITRARFEEL +DLFRSTLEPVEKALRDAK
Sbjct: 266 ACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAK 325
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
LDK IHD+VLVGGSTRIPK+QKLLQD FNG++LNKSINPDE IL GDKS
Sbjct: 326 LDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKS 385
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
E VQD G+ETAGGVMTALIKRN YSDNQPGVLIQVYEG
Sbjct: 386 ENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEG 445
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLG+FEL+GIPPAPRGVPQIEVTFDIDANG
Sbjct: 446 ERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANG 484
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 431 bits (1109), Expect = e-120
Identities = 221/279 (79%), Positives = 236/279 (84%)
Frame = +2
Query: 2 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRT 181
DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF EFKRKHKKD++ N RA+RRLRT
Sbjct: 207 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRT 266
Query: 182 ACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAK 361
ACERAKRTLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEK+LRDAK
Sbjct: 267 ACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAK 326
Query: 362 LDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKS 541
+DK +HDIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKS
Sbjct: 327 MDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKS 386
Query: 542 EAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEG 721
EAVQD GIETAGGVMTALIKRN YSDNQPGVLIQVYEG
Sbjct: 387 EAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEG 446
Query: 722 ERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANG 838
ERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANG
Sbjct: 447 ERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANG 485
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,415,608
Number of Sequences: 369166
Number of extensions: 1490386
Number of successful extensions: 5167
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4339
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)