Planarian EST Database


Dr_sW_002_F02

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_002_F02
         (245 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30652|YOW6_CAEEL  Hypothetical protein ZK643.6 precursor       52   6e-07
sp|P54190|TES26_TOXCA  26 kDa secreted antigen precursor (To...    40   0.002
sp|Q29116|TENA_PIG  Tenascin precursor (TN) (Hexabrachion) (...    36   0.031
sp|Q19673|TYR3_CAEEL  Putative tyrosinase-like protein tyr-3...    35   0.070
sp|P10039|TENA_CHICK  Tenascin precursor (TN) (Hexabrachion)...    34   0.12 
sp|Q09662|YS51_CAEEL  Hypothetical protein ZK673.1 in chromo...    34   0.12 
sp|P24821|TENA_HUMAN  Tenascin precursor (TN) (Hexabrachion)...    33   0.16 
sp|P22105|TENX_HUMAN  Tenascin-X precursor (TN-X) (Hexabrach...    33   0.20 
sp|P61782|HIS51_METMP  Imidazole glycerol phosphate synthase...    33   0.20 
sp|Q05546|TENR_RAT  Tenascin-R precursor (TN-R) (Restrictin)...    32   0.59 
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
          Length = 180

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
 Frame = +2

Query: 2   CTDSGDDCSSKTGEDCTLEE----VYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMD- 166
           CTD  +DCS      C+++E    ++  CPK+C+ C  C D+   C +   RG C K D 
Sbjct: 107 CTDLANDCSYNQNR-CSVKEYSSLMHRLCPKTCNACNICEDANKMCPIWVPRGFCSKFDH 165

Query: 167 DRV---CRKTCGHC 199
           D+V   C K+C  C
Sbjct: 166 DKVQKSCAKSCNIC 179
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
           antigen 26) (TES-26)
          Length = 262

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
 Frame = +2

Query: 2   CTDSGDDCSSKTGEDCT---LEEVYNKCPKSCHFCGDCADSRPDCDV---LKERGDCDKM 163
           C DS  DC++  G   T    + + N+C ++C+ C DC D   +C     L +    + +
Sbjct: 23  CMDSASDCAANAGSCFTRPVSQVLQNRCQRTCNTC-DCRDEANNCAASINLCQNPTFEPL 81

Query: 164 DDRVCRKTCGHC 199
               C+KTCG C
Sbjct: 82  VRDRCQKTCGLC 93
>sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
           (GMEM) (JI) (Miotendinous antigen)
           (Glioma-associated-extracellular matrix antigen) (GP
           150-225) (Tenascin-C) (TN-C) (P230)
          Length = 1746

 Score = 35.8 bits (81), Expect = 0.031
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +2

Query: 32  KTGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 199
           +TGEDC+      +CP  CH  G C   R +C+   +  DC +M    C   C   G C
Sbjct: 429 RTGEDCS----QLRCPNDCHGRGRCVQGRCECEHGFQGYDCSEMS---CPHDCHQHGRC 480

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +2

Query: 38  GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 163
           G DC+      +CP  CH  G C D R +CD   E  DC ++
Sbjct: 369 GADCS----ERRCPSDCHNRGRCLDGRCECDDGFEGEDCGEL 406

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 38  GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 190
           G +C+  E    CP +CH  G C D +  C+      DC ++    C   C
Sbjct: 182 GPNCSEPE----CPSNCHLRGQCVDGQCVCNEGFTGEDCSQL---ACPSDC 225

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVC 178
           C D    C     GEDC        C  +CH  G C ++   CD      DC ++   +C
Sbjct: 263 CVDGRCVCQEGFAGEDCNEP----LCLHNCHGRGRCVENECVCDEGFTGEDCGEL---IC 315

Query: 179 RKTC---GHC 199
            K C   G C
Sbjct: 316 PKDCFDRGRC 325

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 163
           TGEDC   E+   CPK C   G C +    CD   E  DC ++
Sbjct: 306 TGEDCG--ELI--CPKDCFDRGRCINGTCYCDEGFEGEDCGRL 344

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 9/49 (18%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDC 154
           TGEDC   E+  +CP  C   G C D R         PDC  L    DC
Sbjct: 492 TGEDC--REL--RCPGDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDC 536

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 196
           TG+DC       +CP  CH  G C D +  C       DC +   R C   C +
Sbjct: 554 TGKDCG----QRRCPGDCHGQGRCVDGQCVCHEGFTGLDCGQ---RSCPNDCSN 600

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 163
           C D   +C     GEDC       +CP  C   G C + +  CD  +   DC ++
Sbjct: 387 CLDGRCECDDGFEGEDCG----ELRCPGGCSGHGRCVNGQCVCDEGRTGEDCSQL 437
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
          Length = 683

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
 Frame = +2

Query: 71  KCPKSCHFC------GDCADSRPDCDVLKERGDC--DKMDDRVCRKTCGHC 199
           +C  SC  C      G CAD   DC     RG+C  +K     CR++C  C
Sbjct: 607 QCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECLKNKWMPENCRRSCNTC 657

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 13/79 (16%)
 Frame = +2

Query: 2   CTDSGDDCSSKTGE-DCTLEEVYNK--CPKSCHFCG-------DCADSRPDCDVLKERGD 151
           C +  + C   + + +C    VY    C  SC  C        +C+D   +C +    G+
Sbjct: 462 CFNENECCGPWSAKGECQKNPVYMNVWCKASCRQCTPNYNINEECSDRHTNCAMWSRSGE 521

Query: 152 CDKMD---DRVCRKTCGHC 199
           C+K        CR +C  C
Sbjct: 522 CNKNPLWMSENCRSSCQKC 540
>sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
           (GMEM) (JI) (Miotendinous antigen)
           (Glioma-associated-extracellular matrix antigen) (GP
           150-225)
          Length = 1808

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 199
           TGEDC        CP +CH  G C D+   CD      DC ++   +C   C   G C
Sbjct: 276 TGEDCNEP----LCPNNCHNRGRCVDNECVCDEGYTGEDCGEL---ICPNDCFDRGRC 326

 Score = 32.0 bits (71), Expect = 0.45
 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
 Frame = +2

Query: 14  GDDCSSKTGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDC 154
           GDDCS K            +CPK C+  G C D R          DC  L+   DC
Sbjct: 370 GDDCSQK------------RCPKDCNNRGHCVDGRCVCHEGYLGEDCGELRCPNDC 413

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 199
           TGEDC       +CP  CH  G C + R  CD      DC ++    C   C   G C
Sbjct: 493 TGEDCG----ELRCPNDCHNRGRCVEGRCVCDNGFMGEDCGELS---CPNDCHQHGRC 543

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 18/53 (33%), Positives = 20/53 (37%)
 Frame = +2

Query: 38  GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 196
           GEDC        CP  CH  G C D R  C       DC    +R C   C +
Sbjct: 525 GEDCG----ELSCPNDCHQHGRCVDGRCVCHEGFTGEDC---RERSCPNDCNN 570

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCD 130
           C D    C    TGEDC        CP  C+  G C + R  C+
Sbjct: 543 CVDGRCVCHEGFTGEDCR----ERSCPNDCNNVGRCVEGRCVCE 582
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
          Length = 154

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 14/56 (25%)
 Frame = +2

Query: 74  CPKSCHFCG--------DCADSRPDCDVLKERGDCDKM------DDRVCRKTCGHC 199
           CPK+C FCG         C DS  +C   ++ G C           + C KTC  C
Sbjct: 95  CPKTCGFCGGGSTAAPVQCVDSSTNCANWEKNGFCSSTFYDCANKKQYCAKTCKLC 150
>sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
           (GMEM) (JI) (Miotendinous antigen)
           (Glioma-associated-extracellular matrix antigen) (GP
           150-225) (Tenascin-C) (TN-C)
          Length = 2201

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +2

Query: 11  SGDDCSSKTGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 190
           +G DCS K            +CP  CH  G C D R +CD      DC ++    C   C
Sbjct: 368 AGLDCSEK------------RCPADCHNRGRCVDGRCECDDGFTGADCGELK---CPNGC 412

Query: 191 -GH 196
            GH
Sbjct: 413 SGH 415

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 199
           TGEDC+      +CP  CH  G C + +  C+   +  DC  M    C   C   G C
Sbjct: 430 TGEDCS----QLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMS---CPNDCHQHGRC 480

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 38  GEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 190
           G +C+  E    CP +CH  G C D +  CD      DC ++    C   C
Sbjct: 182 GPNCSEPE----CPGNCHLRGRCIDGQCICDDGFTGEDCSQL---ACPSDC 225

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 199
           TGEDC        CP +CH  G C + +  CD      DC    ++ C   C   G C
Sbjct: 337 TGEDCGKPT----CPHACHTQGRCEEGQCVCDEGFAGLDC---SEKRCPADCHNRGRC 387

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKM 163
           C D   +C    TG DC       KCP  C   G C + +  CD      DC ++
Sbjct: 387 CVDGRCECDDGFTGADCG----ELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQL 437

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 9/49 (18%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGDC 154
           TGEDC   +    CP+ C   G C D +         PDC  L    DC
Sbjct: 492 TGEDCRDRQ----CPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDC 536

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 74  CPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCGH 196
           CP  CH  G C +    CD      DC    DR C + C +
Sbjct: 470 CPNDCHQHGRCVNGMCVCDDGYTGEDC---RDRQCPRDCSN 507
>sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrachion-like protein)
          Length = 4289

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 20/53 (37%), Positives = 22/53 (41%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTCG 193
           TGEDC +      CP+ C   G C D R  CD      DC     R C   CG
Sbjct: 302 TGEDCGVRS----CPRGCSQRGRCKDGRCVCDPGYTGEDC---GTRSCPWDCG 347

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
 Frame = +2

Query: 2   CTDSGDDC-SSKTGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDC 154
           C D    C    TGEDC+       CP+ C   G C D    CD      DC
Sbjct: 352 CVDGRCVCWPGYTGEDCSTRT----CPRDCRGRGRCEDGECICDTGYSGDDC 399

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 13/72 (18%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGD 151
           C D    C +  +GEDC+       CP  C   G C D R          DC V +   D
Sbjct: 538 CEDGVCVCDAGYSGEDCSTRS----CPGGCRGRGQCLDGRCVCEDGYSGEDCGVRQCPND 593

Query: 152 CDK---MDDRVC 178
           C +     D VC
Sbjct: 594 CSQHGVCQDGVC 605

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 41  EDCTLEEVYNKCPKSCHFCGDCADSRPDCD 130
           EDC++      CP +CH  G C + R  CD
Sbjct: 614 EDCSIRT----CPSNCHGRGRCEEGRCLCD 639

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 23/70 (32%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   CTDSGDDCS-SKTGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVC 178
           C D    C    TGEDC        CP  C   G C D R  C       DC     R C
Sbjct: 321 CKDGRCVCDPGYTGEDCGTRS----CPWDCGEGGRCVDGRCVCWPGYTGEDC---STRTC 373

Query: 179 RKTC---GHC 199
            + C   G C
Sbjct: 374 PRDCRGRGRC 383

 Score = 28.1 bits (61), Expect = 6.6
 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVC 178
           C D    C+   TGEDC       +CP  C   G C D    CD      DC     R C
Sbjct: 507 CVDGRCVCNPGFTGEDCGSR----RCPGDCRGHGLCEDGVCVCDAGYSGEDC---STRSC 559

Query: 179 RKTC---GHC 199
              C   G C
Sbjct: 560 PGGCRGRGQC 569

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 20/66 (30%), Positives = 24/66 (36%), Gaps = 3/66 (4%)
 Frame = +2

Query: 11  SGDDCSSKTGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC 190
           SG DCS ++            CP+ C   G C   R  CD      DC     R C + C
Sbjct: 240 SGPDCSQRS------------CPRGCSQRGRCEGGRCVCDPGYTGDDCGM---RSCPRGC 284

Query: 191 ---GHC 199
              G C
Sbjct: 285 SQRGRC 290

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +2

Query: 35  TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVCRKTC---GHC 199
           TG+DC +      CP+ C   G C + R  C+      DC     R C + C   G C
Sbjct: 271 TGDDCGMRS----CPRGCSQRGRCENGRCVCNPGYTGEDCGV---RSCPRGCSQRGRC 321

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSRPDCDVLKERGDCDKMDDRVC 178
           C D    C +  +G+DC +      CP  C+  G C D R  C       DC     R C
Sbjct: 383 CEDGECICDTGYSGDDCGVRS----CPGDCNQRGRCEDGRCVCWPGYTGTDC---GSRAC 435

Query: 179 RKTC---GHC 199
            + C   G C
Sbjct: 436 PRDCRGRGRC 445
>sp|P61782|HIS51_METMP Imidazole glycerol phosphate synthase subunit hisH1 (IGP synthase
           glutamine amidotransferase subunit) (IGP synthase
           subunit hisH1) (ImGP synthase subunit hisH1) (IGPS
           subunit hisH1)
          Length = 203

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +2

Query: 8   DSGDDCSSKTGEDCTLEEVYNKCPKSCHFCGDC 106
           DS  + S KTG DC+L E+ NKC +   F G C
Sbjct: 51  DSMKNISQKTG-DCSLNEIINKCVQKVPFLGIC 82
>sp|Q05546|TENR_RAT Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural
           recognition molecule J1-160/180)
          Length = 1356

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 13/73 (17%)
 Frame = +2

Query: 20  DCSSK---TGEDCTLEEVYN-------KCPKSCHFCGDCADSRPDCDVLKERGDCDKMDD 169
           DCSS+      +C  EE Y        +CP  C   G CA+    C       DC +   
Sbjct: 238 DCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGYAGEDCSQ--- 294

Query: 170 RVCRKTC---GHC 199
           R C   C   GHC
Sbjct: 295 RRCLNACSGRGHC 307

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 10/61 (16%)
 Frame = +2

Query: 2   CTDSGDDCSSK-TGEDCTLEEVYNKCPKSCHFCGDCADSR---------PDCDVLKERGD 151
           C D    C S+ +G+DC+      +CP  C   G C D            DC  L+  GD
Sbjct: 214 CVDGQCICDSEYSGDDCS----ELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGD 269

Query: 152 C 154
           C
Sbjct: 270 C 270
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,126,110
Number of Sequences: 369166
Number of extensions: 518531
Number of successful extensions: 2113
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2109
length of database: 68,354,980
effective HSP length: 52
effective length of database: 58,748,760
effective search space used: 1703714040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)