Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_E07
(900 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial... 320 3e-87
sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial... 318 1e-86
sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial p... 317 2e-86
sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial... 315 1e-85
sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 (RalDH1) (RAL... 315 1e-85
sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial... 314 2e-85
sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 (RalDH1) (RALDH... 311 1e-84
sp|P12762|ALDH2_HORSE Aldehyde dehydrogenase, mitochondrial... 310 3e-84
sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 (RalDH1) (RAL... 310 4e-84
sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RAL... 309 8e-84
>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDH1)
(ALDH-E2)
Length = 500
Score = 320 bits (820), Expect = 3e-87
Identities = 162/296 (54%), Positives = 202/296 (68%), Gaps = 1/296 (0%)
Frame = +2
Query: 8 KIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRTLN 187
+IFINNEW ++ TFPT+NP+ +VI QV EG + GS WR ++
Sbjct: 21 QIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGSKEDVDKAVKAARAAFQLGSPWRRMD 80
Query: 188 ASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADKIH 364
AS RG LLN+LADLIE + Y++ LE LDNGK YVI+ D++ +K LRYYAG+ADK H
Sbjct: 81 ASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 140
Query: 365 GVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTPLS 544
G T DGDF SYTR EPVGV G IIPWN+P ++ +K+GPALA G +V+K AEQTPL+
Sbjct: 141 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 200
Query: 545 ALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIGET 724
AL++ +LI AGFP GVVNIVPG+GPTAGAA++SH DV K+ FTGSTE+GH+I G +
Sbjct: 201 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSS 260
Query: 725 SLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
+LKRVTLELGGKSP II N GQCC AG+RTFV+ +YD
Sbjct: 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYD 316
>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 517
Score = 318 bits (816), Expect = 1e-86
Identities = 164/296 (55%), Positives = 201/296 (67%), Gaps = 1/296 (0%)
Frame = +2
Query: 8 KIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRTLN 187
+IFINNEW ++ TFPT+NP+ +VI QV EG + GS WR ++
Sbjct: 38 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMD 97
Query: 188 ASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADKIH 364
AS RG LLN+LADLIE + Y++ LE LDNGK YVI+ D++ +K LRYYAG+ADK H
Sbjct: 98 ASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 157
Query: 365 GVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTPLS 544
G T DGDF SYTR EPVGV G IIPWN+P ++ +K+GPALA G +V+K AEQTPL+
Sbjct: 158 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 217
Query: 545 ALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIGET 724
AL++ +LI AGFP GVVNIVPG+GPTAGAA++SH DV K+ FTGSTEIG VI G +
Sbjct: 218 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 277
Query: 725 SLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
+LKRVTLELGGKSP II N GQCC AG+RTFV+ IYD
Sbjct: 278 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYD 333
>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDH1) (ALDH-E2)
Length = 519
Score = 317 bits (813), Expect = 2e-86
Identities = 161/296 (54%), Positives = 201/296 (67%), Gaps = 1/296 (0%)
Frame = +2
Query: 8 KIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRTLN 187
+IFINNEW ++ TFPT+NP+ +VI QV EG + GS WR ++
Sbjct: 40 QIFINNEWHDAVSKKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAAQAAFQLGSPWRRMD 99
Query: 188 ASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADKIH 364
AS RG LL +LADLIE + Y++ LE LDNGK YVI+ D++ +K LRYYAG+ADK H
Sbjct: 100 ASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 159
Query: 365 GVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTPLS 544
G T DGDF SYTR EPVGV G IIPWN+P ++ +K+GPALA G +V+K AEQTPL+
Sbjct: 160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219
Query: 545 ALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIGET 724
AL++ +LI AGFP GVVNIVPG+GPTAGAA++SH DV K+ FTGSTE+GH+I G +
Sbjct: 220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSS 279
Query: 725 SLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
+LKRVTLELGGKSP II N GQCC AG+RTFV+ +YD
Sbjct: 280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYD 335
>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(AHD-M1) (ALDHI) (ALDH-E2)
Length = 519
Score = 315 bits (807), Expect = 1e-85
Identities = 160/296 (54%), Positives = 201/296 (67%), Gaps = 1/296 (0%)
Frame = +2
Query: 8 KIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRTLN 187
+IFINNEW ++ TFPT+NP+ +VI QV EG + GS WR ++
Sbjct: 40 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGNKEDVDKAVKAARAAFQLGSPWRRMD 99
Query: 188 ASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADKIH 364
AS RG LL +LADLIE + Y++ LE LDNGK YVI+ D++ +K LRYYAG+ADK H
Sbjct: 100 ASDRGRLLYRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYH 159
Query: 365 GVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTPLS 544
G T DGDF SYTR EPVGV G IIPWN+P ++ +K+GPALA G +V+K AEQTPL+
Sbjct: 160 GKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLT 219
Query: 545 ALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIGET 724
AL++ +LI AGFP GVVNIVPG+GPTAGAA++SH V K+ FTGSTE+GH+I G +
Sbjct: 220 ALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSS 279
Query: 725 SLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
+LKRVTLELGGKSP II N GQCC AG+RTFV+ ++YD
Sbjct: 280 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYD 335
>sp|P24549|AL1A1_MOUSE Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 315 bits (806), Expect = 1e-85
Identities = 160/297 (53%), Positives = 201/297 (67%), Gaps = 1/297 (0%)
Frame = +2
Query: 5 TKIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRTL 184
TKIFINNEW NS G FP +NP E+VI V+EG + GS WRT+
Sbjct: 21 TKIFINNEWHNSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTM 80
Query: 185 NASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADKI 361
+AS RG LLNKLADL+E + ++ +EAL+ GK + A D+ +K L+Y AG+ADKI
Sbjct: 81 DASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKI 140
Query: 362 HGVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTPL 541
HG T DGD +YTR EP+GV G IIPWN+P ++ I+K+GPAL+ G T+V+KPAEQTPL
Sbjct: 141 HGQTIPSDGDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPL 200
Query: 542 SALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIGE 721
+AL L LI AGFP GVVNIVPGYGPTAGAA+SSH DV K+ FTGST++G +I + G+
Sbjct: 201 TALHLASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGK 260
Query: 722 TSLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
++LKRVTLELGGKSP I+F + GQCCVA +R FVE S+YD
Sbjct: 261 SNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYD 317
>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial precursor (ALDH class 2)
(ALDHI) (ALDH-E2)
Length = 520
Score = 314 bits (804), Expect = 2e-85
Identities = 156/297 (52%), Positives = 201/297 (67%), Gaps = 1/297 (0%)
Frame = +2
Query: 2 FTKIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRT 181
+ +IFINNEW ++ TFPT+NP+ VI V EG + GS WR
Sbjct: 39 YNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQLGSPWRR 98
Query: 182 LNASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADK 358
++AS RG LLN+LADLIE + Y++ LE LDNGK Y+I+ D++ +K LRYYAG+ADK
Sbjct: 99 MDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADK 158
Query: 359 IHGVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTP 538
HG T DGD+ SYTR EPVGV G IIPWN+P ++ +K+GPALA G +V+K AEQTP
Sbjct: 159 YHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTP 218
Query: 539 LSALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIG 718
L+AL++ +LI AGFP GVVN++PG+GPTAGAA++SH DV K+ FTGSTE+GH+I G
Sbjct: 219 LTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 278
Query: 719 ETSLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIY 889
+++LKRVTLE+GGKSP II N GQCC AG+RTFV+ IY
Sbjct: 279 KSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIY 335
>sp|P51647|AL1A1_RAT Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 501
Score = 311 bits (798), Expect = 1e-84
Identities = 157/297 (52%), Positives = 202/297 (68%), Gaps = 1/297 (0%)
Frame = +2
Query: 5 TKIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRTL 184
TKIFINNEW +S G FP +NP E+VI V+EG + GS WRT+
Sbjct: 21 TKIFINNEWHDSVSGKKFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTM 80
Query: 185 NASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADKI 361
+AS RG LLNKLADL+E + ++ +EA++ GK + A D+ S+K L+Y AG+ADKI
Sbjct: 81 DASERGRLLNKLADLMERDRLLLATIEAINGGKVFANAYLSDLGGSIKALKYCAGWADKI 140
Query: 362 HGVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTPL 541
HG T DGD ++TR EP+GV G IIPWN+P ++ I+K+GPAL+ G T+V+KPAEQTPL
Sbjct: 141 HGQTIPSDGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPL 200
Query: 542 SALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIGE 721
+AL + LI AGFP GVVNIVPGYGPTAGAA+SSH DV K+ FTGST++G +I + G+
Sbjct: 201 TALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGK 260
Query: 722 TSLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
++LKRVTLELGGKSP I+F + GQCCVA +R FVE S+YD
Sbjct: 261 SNLKRVTLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYD 317
>sp|P12762|ALDH2_HORSE Aldehyde dehydrogenase, mitochondrial (ALDH class 2) (ALDHI)
(ALDH-E2)
Length = 500
Score = 310 bits (795), Expect = 3e-84
Identities = 157/297 (52%), Positives = 199/297 (67%), Gaps = 1/297 (0%)
Frame = +2
Query: 2 FTKIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRT 181
+ +IFINNEW ++ TFPT+NP+ +VI QV G + GS WR
Sbjct: 19 YNQIFINNEWHDAVSKKTFPTVNPSTGEVICQVAAGDKEDVDRAVKAARAAFQLGSPWRR 78
Query: 182 LNASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADK 358
++AS RG LLN+LADLIE + Y++ LE LDNGK YVI+ D++ +K LRYYAG+ADK
Sbjct: 79 MDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 359 IHGVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTP 538
HG T DGDF SYTR EPVGV G IIPWN+P ++ K+GPALA G +V+K AEQTP
Sbjct: 139 YHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTP 198
Query: 539 LSALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIG 718
L+AL++ +L AGFP GVVN+VPG+GPTAGAA++SH DV K+ FTGSTE+GH+I G
Sbjct: 199 LTALYVANLTKEAGFPPGVVNVVPGFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAG 258
Query: 719 ETSLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIY 889
++LK+VTLELGGKSP II N GQCC AG+RTFV+ +Y
Sbjct: 259 RSNLKKVTLELGGKSPNIIVSDADMDWAVEQAHFALFFNQGQCCGAGSRTFVQEDVY 315
>sp|P27463|AL1A1_CHICK Retinal dehydrogenase 1 (RalDH1) (RALDH 1) (Aldehyde dehydrogenase
family 1 member A1) (Aldehyde dehydrogenase, cytosolic)
(ALHDII) (ALDH-E1)
Length = 509
Score = 310 bits (794), Expect = 4e-84
Identities = 158/298 (53%), Positives = 201/298 (67%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 FTKIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRT 181
+TKIFINNEW +S G F NP NE+ I +V EG + GS WRT
Sbjct: 28 YTKIFINNEWHDSVSGKKFEVFNPANEEKICEVAEGDKADIDKAVKAARKAFELGSPWRT 87
Query: 182 LNASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAK-GDIEFSVKILRYYAGYADK 358
++AS RG LLNKLADL+E + ++ +EA+D GK + A D+ +K +RY AG+ADK
Sbjct: 88 MDASERGRLLNKLADLVERDRLTLATMEAIDGGKLFSTAYLMDLGACIKTIRYCAGWADK 147
Query: 359 IHGVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTP 538
IHG T DG+F ++TR EPVGV G IIPWN+P ++ I+K+ PAL G T+V+KPAEQTP
Sbjct: 148 IHGRTVPMDGNFFTFTRHEPVGVCGQIIPWNFPLVMFIWKIAPALCCGNTVVVKPAEQTP 207
Query: 539 LSALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIG 718
LSAL++G LI AGFP GVVNIVPG+GPTAGAA+S H D+ K++FTGSTE+G +I + G
Sbjct: 208 LSALYMGSLIKEAGFPPGVVNIVPGFGPTAGAAISHHMDIDKVSFTGSTEVGKLIKEAAG 267
Query: 719 ETSLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
+T+LKRVTLELGGKSP IIF + GQCC+AG+R FVE IYD
Sbjct: 268 KTNLKRVTLELGGKSPNIIFADADLDEAAEFAHIGLFYHQGQCCIAGSRIFVEEPIYD 325
>sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 (RalDH2) (RALDH 2) (RALDH(II))
(Retinaldehyde-specific dehydrogenase type 2) (Aldehyde
dehydrogenase family 1 member A2)
Length = 499
Score = 309 bits (791), Expect = 8e-84
Identities = 155/298 (52%), Positives = 201/298 (67%), Gaps = 1/298 (0%)
Frame = +2
Query: 2 FTKIFINNEWCNSEEGLTFPTINPTNEQVIVQVQEGREXXXXXXXXXXXXXXXXGSEWRT 181
+TKIFINNEW NSE G FP NP + + +VQE + GS WR
Sbjct: 18 YTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSVWRR 77
Query: 182 LNASARGLLLNKLADLIELEADYISRLEALDNGKSYVIAKG-DIEFSVKILRYYAGYADK 358
++AS RG LL+KLADL+E + ++ +E+L+ GK ++ A D++ +K LRYYAG+ADK
Sbjct: 78 MDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADK 137
Query: 359 IHGVTTAPDGDFLSYTRIEPVGVVGGIIPWNYPFMLAIFKVGPALAAGCTLVLKPAEQTP 538
IHG+T DGD+ ++TR EP+GV G IIPWN+P ++ +K+ PAL G T+V+KPAEQTP
Sbjct: 138 IHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTP 197
Query: 539 LSALFLGDLILRAGFPKGVVNIVPGYGPTAGAALSSHHDVRKITFTGSTEIGHVIMKTIG 718
LSAL++G LI AGFP GVVNI+PGYGPTAGAA++SH + KI FTGSTE+G +I + G
Sbjct: 198 LSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAG 257
Query: 719 ETSLKRVTLELGGKSPLIIFXXXXXXXXXXXXXXXCMTNHGQCCVAGTRTFVEASIYD 892
++LKRVTLELGGKSP IIF N GQCC AG+R FVE SIY+
Sbjct: 258 RSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYE 315
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,396,025
Number of Sequences: 369166
Number of extensions: 1792963
Number of successful extensions: 5351
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4939
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9078450570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)