Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_D24
(787 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q12931|TRAP1_HUMAN Heat shock protein 75 kDa, mitochondr... 216 6e-56
sp|Q9CQN1|TRAP1_MOUSE Heat shock protein 75 kDa, mitochondr... 215 1e-55
sp|P27741|HSP83_LEIAM Heat shock protein 83 (HSP 83) 103 5e-22
sp|P06660|HSP85_TRYCR Heat shock-like 85 kDa protein 102 9e-22
sp|P27323|HSP81_ARATH Heat shock protein 81-1 (HSP81-1) (He... 102 1e-21
sp|P54651|HSC90_DICDI Heat shock cognate 90 kDa protein 102 2e-21
sp|P36182|HSP82_TOBAC Heat shock protein 82 100 3e-21
sp|P12861|HSP83_TRYBB Heat shock protein 83 100 3e-21
sp|Q25293|HSP83_LEIIN Heat shock protein 83-1 (HSP 83) 100 5e-21
sp|O44001|HSP90_EIMTE Heat shock protein 90 100 6e-21
>sp|Q12931|TRAP1_HUMAN Heat shock protein 75 kDa, mitochondrial precursor (HSP 75) (Tumor
necrosis factor type 1 receptor associated protein)
(TRAP-1) (TNFR-associated protein 1)
Length = 704
Score = 216 bits (550), Expect = 6e-56
Identities = 110/249 (44%), Positives = 159/249 (63%), Gaps = 2/249 (0%)
Frame = +2
Query: 2 STDQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYL 181
+T+Q KE+IA+LLR+ESS LP+G+ TS EYA RM+AG R IY+ AP+R +AEHSPY
Sbjct: 455 ATEQEVKEDIAKLLRYESSALPSGQLTSLSEYASRMRAGTRNIYYLCAPNRHLAEHSPYY 514
Query: 182 EAIKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESEHSEDASNVNIVDPSN--EQSI 355
EA+K K+ EVLF E +DE+ ++ L FD K+L S+E++ D + + + +
Sbjct: 515 EAMKKKDTEVLFCFEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDRSPAAECL 574
Query: 356 SQSDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMGAVRHFIKTSLIDKSDEEK 535
S+ + E L AW+ + +V VKVT RL THP +V+V MGA RHF++ + K+ EE+
Sbjct: 575 SEKETEELMAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEER 634
Query: 536 YMLMNATMEINPTXXXXXXXXXXXXTDEDLAALLINQLYQNALIQAGLVTDSRPIIGDLN 715
L+ T+EINP ++ LA LL++Q+Y+NA+I AGLV D R ++G LN
Sbjct: 635 AQLLQPTLEINPRHALIKKLNQLRASEPGLAQLLVDQIYENAMIAAGLVDDPRAMVGRLN 694
Query: 716 VLLTKAFEK 742
LL KA E+
Sbjct: 695 ELLVKALER 703
>sp|Q9CQN1|TRAP1_MOUSE Heat shock protein 75 kDa, mitochondrial precursor (HSP 75) (Tumor
necrosis factor type 1 receptor associated protein)
(TRAP-1) (TNFR-associated protein 1)
Length = 706
Score = 215 bits (547), Expect = 1e-55
Identities = 111/250 (44%), Positives = 160/250 (64%), Gaps = 3/250 (1%)
Frame = +2
Query: 2 STDQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYL 181
+ +Q KE+IA+LLR+ESS LPAG+ TS +YA RM+AG R IY+ AP+R +AEHSPY
Sbjct: 457 TAEQDIKEDIAKLLRYESSALPAGQLTSLPDYASRMQAGTRNIYYLCAPNRHLAEHSPYY 516
Query: 182 EAIKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESEHSED---ASNVNIVDPSNEQS 352
EA+K K EVLF E +DE+ ++ L FD K+L S+E++ D P++E+
Sbjct: 517 EAMKQKHTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDTSPADER- 575
Query: 353 ISQSDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMGAVRHFIKTSLIDKSDEE 532
+S+ + E+L AW+ + +V VKVT RL THP +V+V MGA RHF++ + K+ EE
Sbjct: 576 LSEKETEDLMAWMRNALGSRVTNVKVTFRLDTHPAMVTVLEMGAARHFLRMQQLAKTQEE 635
Query: 533 KYMLMNATMEINPTXXXXXXXXXXXXTDEDLAALLINQLYQNALIQAGLVTDSRPIIGDL 712
+ L+ T+EINP ++ +LA LL++Q+Y+NA+I AGLV D R ++G L
Sbjct: 636 RAQLLQPTLEINPRHTLIKKLCQLRESEPELAQLLVDQIYENAMIAAGLVDDPRAMVGRL 695
Query: 713 NVLLTKAFEK 742
N LL K EK
Sbjct: 696 NDLLVKVLEK 705
>sp|P27741|HSP83_LEIAM Heat shock protein 83 (HSP 83)
Length = 701
Score = 103 bits (257), Expect = 5e-22
Identities = 67/231 (29%), Positives = 118/231 (51%), Gaps = 8/231 (3%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGK-HTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLE 184
D ++ + +LLRF S++ +G+ T+ K+Y RMKA IY+ S++ E SP++E
Sbjct: 424 DTANRKKLMELLRFYSTE--SGEVMTTLKDYVTRMKAEQNSIYYITGDSKKKLESSPFIE 481
Query: 185 AIKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESE--HSEDASNVNIVDPSNEQSIS 358
K + EVLF+ EPYDE VM Q+ F++K+ + E H E++ + ++
Sbjct: 482 QAKRRGFEVLFMTEPYDEYVMQQVKDFEDKKFACLTKEGVHFEESE-----EEKRQREEE 536
Query: 359 QSDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMGAVRH---FIKTSLIDKSDE 529
++ E L +++ + KV V V++RL+T PC++ G H ++ + S
Sbjct: 537 KATCEKLCKTMKEVLGDKVEKVTVSERLSTSPCILVTSEFGWSAHMEQMMRNQALRDSSM 596
Query: 530 EKYMLMNATMEINPTXXXXXXXXXXXXTDEDLAAL--LINQLYQNALIQAG 676
+YM+ TME+NP DE+ A+ L+ L+ +L+ +G
Sbjct: 597 AQYMMSKKTMELNPKHPIIKELRRRVEADENDKAVKDLVFLLFDTSLLTSG 647
>sp|P06660|HSP85_TRYCR Heat shock-like 85 kDa protein
Length = 704
Score = 102 bits (255), Expect = 9e-22
Identities = 69/235 (29%), Positives = 115/235 (48%), Gaps = 8/235 (3%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKH-TSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLE 184
D ++ + +LLRF SS+ +G+ T+ K+Y RMK G + IY+ S++ E SP++E
Sbjct: 427 DSANRKKLMELLRFHSSE--SGEDMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIE 484
Query: 185 AIKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESE--HSEDASNVNIVDPSNEQSIS 358
+ + EVLF+ EP DE VM Q+ F++K+ + E H E+ + ++
Sbjct: 485 QARRRGFEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEETE-----EEKKQREEE 539
Query: 359 QSDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMGAVRH---FIKTSLIDKSDE 529
++ E L ++ + KV V V++RL T PC++ G H ++ + S
Sbjct: 540 KTAYERLCKAMKDVLGDKVEKVVVSERLATSPCILVTSEFGWSAHMEQIMRNQALRDSSM 599
Query: 530 EKYMLMNATMEINPTXXXXXXXXXXXXTDEDLAAL--LINQLYQNALIQAGLVTD 688
YM+ TMEINP DE+ A+ L+ L+ AL+ +G D
Sbjct: 600 SAYMMSKKTMEINPAHPIVKELKRRVEADENDKAVKDLVYLLFDTALLTSGFTLD 654
>sp|P27323|HSP81_ARATH Heat shock protein 81-1 (HSP81-1) (Heat shock protein 83)
Length = 700
Score = 102 bits (254), Expect = 1e-21
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 9/236 (3%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLEA 187
D + IA LLR+ S+K + TSFK+Y RMK G + I++ S++ E+SP+LE
Sbjct: 424 DSQNRGKIADLLRYHSTK-SGDEMTSFKDYVTRMKEGQKDIFYITGESKKAVENSPFLER 482
Query: 188 IKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESEHSEDASNVNIVDPSNEQSISQSD 367
+K + EVL++++ DE + QL +D K+L S E + + D + E+ + +
Sbjct: 483 LKKRGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKE------GLKLEDETEEEKKKREE 536
Query: 368 A----ENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMG---AVRHFIKTSLIDKSD 526
ENL I++ + KV V V+ R+ PC + G + +K + S
Sbjct: 537 KKKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSS 596
Query: 527 EEKYMLMNATMEINPTXXXXXXXXXXXXTDEDLAAL--LINQLYQNALIQAGLVTD 688
YM TMEINP D++ ++ L+ LY+ AL+ +G D
Sbjct: 597 MSGYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVMLLYETALLTSGFSLD 652
>sp|P54651|HSC90_DICDI Heat shock cognate 90 kDa protein
Length = 700
Score = 102 bits (253), Expect = 2e-21
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 6/233 (2%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLEA 187
D +E A LLR+++SK + + KEY RMK G +IY+ S++ E+SP++E
Sbjct: 420 DSQNREKFADLLRYQTSK-SGDELVTLKEYVGRMKEGQNEIYYITGESKKAVENSPFIEG 478
Query: 188 IKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESEHSEDASNVNIVDPSNEQSISQSD 367
+K K +EV+++ +P DE + QL +D K+L SI E + + + +E+ ++ D
Sbjct: 479 LKKKNLEVIYMCDPIDEYAVQQLKEYDGKKLVSITKE------GLKLDETEDEKKKAEQD 532
Query: 368 A---ENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMG---AVRHFIKTSLIDKSDE 529
E L ++ + KV V ++ RL PC++ G + +K + S
Sbjct: 533 KAANEELLKQVKDVLGDKVEKVVLSTRLANSPCVLVTSEYGWSANMERIMKAQALRDSSM 592
Query: 530 EKYMLMNATMEINPTXXXXXXXXXXXXTDEDLAALLINQLYQNALIQAGLVTD 688
YM T+E+NP + LY+ AL+ +G D
Sbjct: 593 SSYMSSKKTLELNPDHPIVRDLAKKAAEKSKTFKDFVYLLYETALLTSGFSLD 645
>sp|P36182|HSP82_TOBAC Heat shock protein 82
Length = 499
Score = 100 bits (250), Expect = 3e-21
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 9/236 (3%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLEA 187
D + +A LLR+ S+K + TS K+Y RMK G + IY+ S++ E+SP+LE
Sbjct: 224 DSQNRAKLADLLRYHSTK-SGDEMTSLKDYVTRMKEGQKDIYYITGESKKAVENSPFLER 282
Query: 188 IKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESEHSEDASNVNIVDPSNEQSISQSD 367
+K K EVL++++ DE + QL +D K+L S E + + D S E+ + +
Sbjct: 283 LKKKGYEVLYMVDAIDEYAVGQLKEYDGKKLVSATKE------GLKLDDDSEEEKKKKEE 336
Query: 368 A----ENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMG---AVRHFIKTSLIDKSD 526
ENL I+ + KV V V+ R+ PC + G + +K + S
Sbjct: 337 KKKSFENLCKIIKDILGDKVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMKAQALRDSS 396
Query: 527 EEKYMLMNATMEINPTXXXXXXXXXXXXTDEDLAAL--LINQLYQNALIQAGLVTD 688
YM TMEINP D++ ++ L+ L++ AL+ +G D
Sbjct: 397 MSSYMSSKKTMEINPDNGIMEELRKRAEADKNDKSVKDLVLLLFETALLTSGFSLD 452
>sp|P12861|HSP83_TRYBB Heat shock protein 83
Length = 703
Score = 100 bits (250), Expect = 3e-21
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLEA 187
D ++ + +LLRF SS+ + T+ K+Y RMK G + IY+ S++ E SP++E
Sbjct: 427 DSTNRKKLMELLRFHSSE-SGEEMTTLKDYVTRMKEGQKCIYYVTGDSKKKLETSPFIEQ 485
Query: 188 IKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESE--HSEDASNVNIVDPSNEQSISQ 361
+ + +EVLF+ +P DE VM Q+ F++K+ + E H E+ + ++ +
Sbjct: 486 ARRRGMEVLFMTDPIDEYVMQQVKDFEDKKFACLTKEGVHFEETE-----EEKKQREEEK 540
Query: 362 SDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMGAVRH---FIKTSLIDKSDEE 532
+ E L +++ + KV V V+ RL T PC++ G H ++ + S
Sbjct: 541 ASYERLCKAMKEVLGDKVEKVVVSDRLATSPCILVTSEFGWSAHMEQIMRNQALRDSSMS 600
Query: 533 KYMLMNATMEINPTXXXXXXXXXXXXTDED--LAALLINQLYQNALIQAGLVTDSRPIIG 706
YM+ TMEIN T DE+ A LI L+ +L+ +G D
Sbjct: 601 AYMMRKKTMEINTTHAIVKELKRRVEADENDKAAKDLIFLLFDTSLLTSGFTLDDPTAYA 660
Query: 707 D 709
D
Sbjct: 661 D 661
>sp|Q25293|HSP83_LEIIN Heat shock protein 83-1 (HSP 83)
Length = 701
Score = 100 bits (249), Expect = 5e-21
Identities = 64/230 (27%), Positives = 116/230 (50%), Gaps = 7/230 (3%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKHTSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLEA 187
D ++ + + +RF SS+ + T+ K+Y RMKAG + IY+ S++ E SP++E
Sbjct: 423 DTANRKKLMEFVRFYSSE-SGEEMTTLKDYVTRMKAGQKSIYYITGDSKKKLESSPFIEQ 481
Query: 188 IKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESE--HSEDASNVNIVDPSNEQSISQ 361
K + +EVLF+ EP DE VM Q+ F++K+ + E H E++ + ++ +
Sbjct: 482 AKRRGLEVLFMTEPIDEYVMQQVKDFEDKKFACLTKEGVHFEESE-----EEKQQREEEK 536
Query: 362 SDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMGAVRH---FIKTSLIDKSDEE 532
+ E L +++ + KV V V++ L+T PC++ G H ++ + S
Sbjct: 537 AACEKLCKTMKEVLGDKVEKVIVSECLSTSPCILVTSEFGWSAHMEQIMRNQALRDSSMA 596
Query: 533 KYMLMNATMEINPTXXXXXXXXXXXXTDEDLAAL--LINQLYQNALIQAG 676
+YM+ TME+NP DE+ A+ L+ L+ +L+ +G
Sbjct: 597 QYMMSKKTMELNPRHPIIKELRRRVDADENDKAVKDLVFLLFDTSLLTSG 646
>sp|O44001|HSP90_EIMTE Heat shock protein 90
Length = 713
Score = 100 bits (248), Expect = 6e-21
Identities = 72/233 (30%), Positives = 111/233 (47%), Gaps = 10/233 (4%)
Frame = +2
Query: 8 DQMEKENIAQLLRFESSKLPAGKH-TSFKEYAERMKAGARKIYFFAAPSREIAEHSPYLE 184
D + IA+LLRF SSK +G+ SFKEY +RMK G + IY+ SR+ +SP+LE
Sbjct: 436 DSANRAKIAELLRFHSSK--SGEDMVSFKEYVDRMKEGQKDIYYITGESRQTVANSPFLE 493
Query: 185 AIKDKEIEVLFLLEPYDEMVMIQLNRFDNKELCSIESEHSEDASNVNIVDPSNEQSIS-- 358
+ K EVL++ +P DE + QL FDN +L E E +D S E+
Sbjct: 494 KLTKKGYEVLYMTDPIDEYAVQQLKEFDNHKLRCCTKEGLE-------IDESEEEKKKFE 546
Query: 359 --QSDAENLTAWIEKQMKPKVATVKVTQRLTTHPCLVSVKNMG---AVRHFIKTSLIDKS 523
+++ E L I++ + KV V ++ R+T PC++ G + +K + +
Sbjct: 547 ELKAEFEPLLKLIKEVLHDKVDKVVLSNRITDSPCVLVTTEFGWSANMERIMKAQALRDN 606
Query: 524 DEEKYMLMNATMEINPTXXXXXXXXXXXXTDEDLAAL--LINQLYQNALIQAG 676
YM+ TME+N D+ + LI LY AL+ +G
Sbjct: 607 SMTSYMVSKKTMEVNGHHSIMIEIKNKAAVDKSDKTVKDLIWLLYDTALLTSG 659
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,320,788
Number of Sequences: 369166
Number of extensions: 1910218
Number of successful extensions: 5138
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5073
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7405750800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)