Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_A20
(837 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 441 e-123
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 441 e-123
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 441 e-123
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 440 e-123
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 436 e-122
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 435 e-122
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 432 e-121
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 428 e-120
sp|P11147|HSP7D_DROME Heat shock 70 kDa protein cognate 4 (... 427 e-119
sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1)... 426 e-119
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 441 bits (1134), Expect = e-123
Identities = 230/278 (82%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIV
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 336 LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 441 bits (1134), Expect = e-123
Identities = 230/278 (82%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIV
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 336 LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 441 bits (1134), Expect = e-123
Identities = 230/278 (82%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDIS+NKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIV
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 336 LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 440 bits (1132), Expect = e-123
Identities = 229/278 (82%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKHKKDISDNKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK IHDIV
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 336 LVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDK 493
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 436 bits (1120), Expect = e-122
Identities = 228/278 (82%), Positives = 232/278 (83%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHFI EFKR KKDIS+NKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRNDKKDISENKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IHDIV
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 336 LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 493
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 435 bits (1119), Expect = e-122
Identities = 225/278 (80%), Positives = 233/278 (83%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRK+KKDISDNKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISDNKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK+DK +HDIV
Sbjct: 276 SSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 336 LVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADK 493
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 432 bits (1112), Expect = e-121
Identities = 222/278 (79%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNRMVNHF+QEFKRK+KKD++ NKRA+RRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSL+EGIDFYTSITRARFEELNADLFRST+EPVEK+LRDAK+DK IHDIV
Sbjct: 276 SSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKSQIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPK+QKLLQD FNGKELNKSINPDE IL GDKSE VQD
Sbjct: 336 LVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMT LIKRN YSDNQPGVLIQV+EGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAVEK
Sbjct: 456 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 493
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 428 bits (1101), Expect = e-120
Identities = 218/278 (78%), Positives = 236/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVK+TAGDTHLGGEDFDNR+V+HF++EFKRKHKKDIS NKRA+RRLRTACERAKRTLS
Sbjct: 218 IFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLS 277
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK+DK IHD+V
Sbjct: 278 SSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIHDVV 337
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD
Sbjct: 338 LVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLLLLD 397
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKDNNL
Sbjct: 398 VAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKDNNL 457
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K
Sbjct: 458 LGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDK 495
>sp|P11147|HSP7D_DROME Heat shock 70 kDa protein cognate 4 (Heat shock 70 kDa protein 88E)
Length = 651
Score = 427 bits (1097), Expect = e-119
Identities = 217/278 (78%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVKSTAGDTHLGGEDFDNR+V HF+QEFKRKHKKD++ NKRA+RRLRTACERAKRTLS
Sbjct: 216 IFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA+IEIDSL+EG DFYTSITRARFEELNADLFRST++PVEKALRDAKLDK IHDIV
Sbjct: 276 SSTQASIEIDSLFEGTDFYTSITRARFEELNADLFRSTMDPVEKALRDAKLDKSVIHDIV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPK+Q+LLQDLFNGKELNKSINPDE IL GDKS+ VQD
Sbjct: 336 LVGGSTRIPKVQRLLQDLFNGKELNKSINPDEAVAYGAAVQAAILHGDKSQEVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
GIETAGGVM+ LIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VTPLSLGIETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LGKFEL+GIPPAPRGVPQIEVTFDIDANGILNV+A+E+
Sbjct: 456 LGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALER 493
>sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1) (HSP70-1/HSP70-2)
Length = 641
Score = 426 bits (1095), Expect = e-119
Identities = 217/278 (78%), Positives = 234/278 (84%)
Frame = +2
Query: 2 IFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKKDISDNKRAVRRLRTACERAKRTLS 181
IFEVK+TAGDTHLGGEDFDNR+VNHF++EFKRKHKKDIS NKRAVRRLRTACERAKRTLS
Sbjct: 216 IFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLS 275
Query: 182 SSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIHDIV 361
SS QA++EIDSL+EGIDFYTSITRARFEEL +DLFRSTLEPVEKALRDAKLDK IHD+V
Sbjct: 276 SSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIHDLV 335
Query: 362 LVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXXXXX 541
LVGGSTRIPK+QKLLQD FNG++LNKSINPDE IL GDKSE VQD
Sbjct: 336 LVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLD 395
Query: 542 XXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNL 721
G+ETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKDNNL
Sbjct: 396 VAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNL 455
Query: 722 LGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEK 835
LG+FEL+GIPPAPRGVPQIEVTFDIDANGILNV+A +K
Sbjct: 456 LGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDK 493
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,870,690
Number of Sequences: 369166
Number of extensions: 1419254
Number of successful extensions: 5028
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4212
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8148988185
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)