Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_A18
(266 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 54 1e-07
sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion)... 37 0.014
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 37 0.019
sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion)... 36 0.024
sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrach... 36 0.032
sp|Q05546|TENR_RAT Tenascin-R precursor (TN-R) (Restrictin)... 35 0.042
sp|Q8BYI9|TENR_MOUSE Tenascin-R precursor (TN-R) (Restricti... 35 0.042
sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (... 35 0.054
sp|P98163|YL_DROME Putative vitellogenin receptor precursor... 33 0.27
sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-relat... 32 0.35
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 53.5 bits (127), Expect = 1e-07
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = +3
Query: 21 ECTDSGDDCSSKTGEDCTLED----VYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMD 188
ECTD +DCS C++++ ++ CPK+C+ C C D+ +C + RG C K D
Sbjct: 106 ECTDLANDCSYNQNR-CSVKEYSSLMHRLCPKTCNACNICEDANKMCPIWVPRGFCSKFD 164
Query: 189 -DRV---CRKTCGHC 221
D+V C K+C C
Sbjct: 165 HDKVQKSCAKSCNIC 179
>sp|P10039|TENA_CHICK Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225)
Length = 1808
Score = 37.0 bits (84), Expect = 0.014
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC---GHC 221
TGEDC CP +CH G C D+ VCD DC ++ +C C G C
Sbjct: 276 TGEDCN----EPLCPNNCHNRGRCVDNECVCDEGYTGEDCGEL---ICPNDCFDRGRC 326
Score = 36.2 bits (82), Expect = 0.024
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 10/80 (12%)
Frame = +3
Query: 12 CEDECTDSGDDCSSK-------TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERG 170
C ++C G + + TGEDC +CP CH G C + R VCD
Sbjct: 471 CPNDCNSHGRCVNGQCVCDEGYTGEDCG----ELRCPNDCHNRGRCVEGRCVCDNGFMGE 526
Query: 171 DCDKMDDRVCRKTC---GHC 221
DC ++ C C G C
Sbjct: 527 DCGELS---CPNDCHQHGRC 543
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +3
Query: 36 GDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
GDDCS K +CPK C+ G C D R VC DC ++
Sbjct: 370 GDDCSQK------------RCPKDCNNRGHCVDGRCVCHEGYLGEDCGEL 407
Score = 32.7 bits (73), Expect = 0.27
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +3
Query: 9 MCEDECTDSGDDCSSK-------TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKER 167
+C ++C D G + TGEDC CP +C+ G C + VC
Sbjct: 315 ICPNDCFDRGRCINGTCFCEEGYTGEDCG----ELTCPNNCNGNGRCENGLCVCHEGFVG 370
Query: 168 GDCDKMDDRVCRKTC---GHC 221
DC + + C K C GHC
Sbjct: 371 DDCSQ---KRCPKDCNNRGHC 388
Score = 32.7 bits (73), Expect = 0.27
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Frame = +3
Query: 12 CEDECTDSGDDCSSKT-------GEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERG 170
C ++C + G + GEDC CP CH G C D R VC
Sbjct: 502 CPNDCHNRGRCVEGRCVCDNGFMGEDCG----ELSCPNDCHQHGRCVDGRCVCHEGFTGE 557
Query: 171 DCDKMDDRVCRKTCGH 218
DC +R C C +
Sbjct: 558 DC---RERSCPNDCNN 570
Score = 30.8 bits (68), Expect = 1.0
Identities = 24/82 (29%), Positives = 28/82 (34%), Gaps = 10/82 (12%)
Frame = +3
Query: 6 AMCEDECTDSGDDCSSK-------TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKE 164
A C +C D G TG DC E CP C G C R VC
Sbjct: 221 AACPSDCNDQGKCVDGVCVCFEGYTGPDCGEE----LCPHGCGIHGRCVGGRCVCHEGFT 276
Query: 165 RGDCDKMDDRVCRKTC---GHC 221
DC ++ +C C G C
Sbjct: 277 GEDC---NEPLCPNNCHNRGRC 295
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 7/65 (10%)
Frame = +3
Query: 12 CEDECTDSGDDCSSKT-------GEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERG 170
C +C + G + GEDC +CP CH G C + + VCD
Sbjct: 378 CPKDCNNRGHCVDGRCVCHEGYLGEDCG----ELRCPNDCHNRGRCINGQCVCDEGFIGE 433
Query: 171 DCDKM 185
DC ++
Sbjct: 434 DCGEL 438
Score = 30.4 bits (67), Expect = 1.3
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCD 152
C D C TGEDC CP C+ G C + R VC+
Sbjct: 543 CVDGRCVCHEGFTGEDCRERS----CPNDCNNVGRCVEGRCVCE 582
Score = 29.6 bits (65), Expect = 2.3
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Frame = +3
Query: 12 CEDECTDSGDDCSSKT-------GEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERG 170
C ++C + G + + GEDC +CP C+ G C + + VCD
Sbjct: 440 CPNDCHNRGRCVNGQCECHEGFIGEDCG----ELRCPNDCNSHGRCVNGQCVCDEGYTGE 495
Query: 171 DCDKM 185
DC ++
Sbjct: 496 DCGEL 500
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 36.6 bits (83), Expect = 0.019
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +3
Query: 21 ECTDSGDDCSSKTGEDCT---LEDVYTKCPKSCHFCGDCADSRPVCDV---LKERGDCDK 182
+C DS DC++ G T + + +C ++C+ C DC D C L + +
Sbjct: 22 QCMDSASDCAANAGSCFTRPVSQVLQNRCQRTCNTC-DCRDEANNCAASINLCQNPTFEP 80
Query: 183 MDDRVCRKTCGHC 221
+ C+KTCG C
Sbjct: 81 LVRDRCQKTCGLC 93
>sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C)
Length = 2201
Score = 36.2 bits (82), Expect = 0.024
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC---GHC 221
TGEDC+ +CP CH G C + + VC+ + DC M C C G C
Sbjct: 430 TGEDCS----QLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMS---CPNDCHQHGRC 480
Score = 33.9 bits (76), Expect = 0.12
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +3
Query: 9 MCEDECTDSGDDCSSK-------TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKER 167
+C ++C D G + TGEDC CP +CH G C + + VCD
Sbjct: 314 ICPNDCFDRGRCINGTCYCEEGFTGEDCGKPT----CPHACHTQGRCEEGQCVCDEGFAG 369
Query: 168 GDCDKMDDRVCRKTC---GHC 221
DC ++ C C G C
Sbjct: 370 LDC---SEKRCPADCHNRGRC 387
Score = 32.3 bits (72), Expect = 0.35
Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Frame = +3
Query: 12 CEDECTDSGDDCSSKT-------GEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERG 170
C ++C G K G DC+ CP CH G C + VCD
Sbjct: 439 CPNDCHSRGRCVEGKCVCEQGFKGYDCS----DMSCPNDCHQHGRCVNGMCVCDDGYTGE 494
Query: 171 DCDKMDDRVCRKTCGH 218
DC DR C + C +
Sbjct: 495 DC---RDRQCPRDCSN 507
Score = 32.0 bits (71), Expect = 0.46
Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 33 SGDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC 212
+G DCS K +CP CH G C D R CD DC ++ C C
Sbjct: 368 AGLDCSEK------------RCPADCHNRGRCVDGRCECDDGFTGADCGELK---CPNGC 412
Query: 213 -GH 218
GH
Sbjct: 413 SGH 415
Score = 32.0 bits (71), Expect = 0.46
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
C D +C TG DC KCP C G C + + VCD DC ++
Sbjct: 387 CVDGRCECDDGFTGADCG----ELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQL 437
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 93 KCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC 212
+CP +CH G C D + +CD DC ++ C C
Sbjct: 189 ECPGNCHLRGRCIDGQCICDDGFTGEDCSQL---ACPSDC 225
Score = 29.6 bits (65), Expect = 2.3
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC---GHC 221
TGEDC +CP+ C G C D + VC+ DC ++ C C G C
Sbjct: 492 TGEDCRDR----QCPRDCSNRGLCVDGQCVCEDGFTGPDCAELS---CPNDCHGQGRC 542
Score = 29.3 bits (64), Expect = 3.0
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 17/66 (25%)
Frame = +3
Query: 3 VAMCED-----ECTDSG--DDCSSK---TGEDCTLEDVYT-------KCPKSCHFCGDCA 131
+ +C+D +C D DCS++ C ED +T CP CH G C
Sbjct: 484 MCVCDDGYTGEDCRDRQCPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRCV 543
Query: 132 DSRPVC 149
+ + VC
Sbjct: 544 NGQCVC 549
Score = 28.9 bits (63), Expect = 3.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 60 GEDCTLEDVYTKCPKSCHFCGDCADSRPVC 149
G+DC + +CP CH G C D + +C
Sbjct: 555 GKDCKEQ----RCPSDCHGQGRCVDGQCIC 580
Score = 28.9 bits (63), Expect = 3.9
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +3
Query: 15 EDECTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
+ C D C TG DC CP C+ G C R +C+ DC ++
Sbjct: 570 QGRCVDGQCICHEGFTGLDCGQHS----CPSDCNNLGQCVSGRCICNEGYSGEDCSEV 623
Score = 28.1 bits (61), Expect = 6.7
Identities = 18/64 (28%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVC 200
C D C TGEDC+ CP C+ G C + +C DC + +C
Sbjct: 200 CIDGQCICDDGFTGEDCS----QLACPSDCNDQGKCVNGVCICFEGYAGADCSR---EIC 252
Query: 201 RKTC 212
C
Sbjct: 253 PVPC 256
>sp|P22105|TENX_HUMAN Tenascin-X precursor (TN-X) (Hexabrachion-like protein)
Length = 4289
Score = 35.8 bits (81), Expect = 0.032
Identities = 21/53 (39%), Positives = 23/53 (43%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTCG 215
TGEDC + CP+ C G C D R VCD DC R C CG
Sbjct: 302 TGEDCGVRS----CPRGCSQRGRCKDGRCVCDPGYTGEDC---GTRSCPWDCG 347
Score = 33.9 bits (76), Expect = 0.12
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Frame = +3
Query: 24 CTDSGDDC-SSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDC 176
C D C TGEDC+ CP+ C G C D +CD DC
Sbjct: 352 CVDGRCVCWPGYTGEDCSTRT----CPRDCRGRGRCEDGECICDTGYSGDDC 399
Score = 32.3 bits (72), Expect = 0.35
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +3
Query: 9 MCED-----ECTDSGDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGD 173
+CED + SG+DCS+++ CP C G C D R VC+ D
Sbjct: 537 LCEDGVCVCDAGYSGEDCSTRS------------CPGGCRGRGQCLDGRCVCEDGYSGED 584
Query: 174 CDKMDDRVCRKTC 212
C R C C
Sbjct: 585 CGV---RQCPNDC 594
Score = 32.0 bits (71), Expect = 0.46
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +3
Query: 3 VAMCEDECTDSG----DDCSSKTG---EDCTLEDVYTKCPKSCHFCGDCADSRPVCD 152
V C ++C+ G C G EDC++ CP +CH G C + R +CD
Sbjct: 587 VRQCPNDCSQHGVCQDGVCICWEGYVSEDCSIRT----CPSNCHGRGRCEEGRCLCD 639
Score = 31.2 bits (69), Expect = 0.79
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 8/78 (10%)
Frame = +3
Query: 12 CED-ECTD----SGDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDC 176
CED EC SGDDC ++ CP C+ G C D R VC DC
Sbjct: 383 CEDGECICDTGYSGDDCGVRS------------CPGDCNQRGRCEDGRCVCWPGYTGTDC 430
Query: 177 DKMDDRVCRKTC---GHC 221
R C + C G C
Sbjct: 431 ---GSRACPRDCRGRGRC 445
Score = 30.8 bits (68), Expect = 1.0
Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = +3
Query: 24 CTDSGDDCS-SKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVC 200
C D C TGEDC CP C G C D R VC DC R C
Sbjct: 321 CKDGRCVCDPGYTGEDCGTRS----CPWDCGEGGRCVDGRCVCWPGYTGEDC---STRTC 373
Query: 201 RKTC---GHC 221
+ C G C
Sbjct: 374 PRDCRGRGRC 383
Score = 30.8 bits (68), Expect = 1.0
Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 4/70 (5%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVC 200
C D C+ TGEDC +CP C G C D VCD DC R C
Sbjct: 507 CVDGRCVCNPGFTGEDCGSR----RCPGDCRGHGLCEDGVCVCDAGYSGEDC---STRSC 559
Query: 201 RKTC---GHC 221
C G C
Sbjct: 560 PGGCRGRGQC 569
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/66 (31%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Frame = +3
Query: 33 SGDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC 212
SG DCS ++ CP+ C G C R VCD DC R C + C
Sbjct: 240 SGPDCSQRS------------CPRGCSQRGRCEGGRCVCDPGYTGDDCGM---RSCPRGC 284
Query: 213 ---GHC 221
G C
Sbjct: 285 SQRGRC 290
Score = 30.4 bits (67), Expect = 1.3
Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC---GHC 221
TG+DC + CP+ C G C + R VC+ DC R C + C G C
Sbjct: 271 TGDDCGMRS----CPRGCSQRGRCENGRCVCNPGYTGEDCGV---RSCPRGCSQRGRC 321
Score = 29.3 bits (64), Expect = 3.0
Identities = 25/80 (31%), Positives = 28/80 (35%), Gaps = 8/80 (10%)
Frame = +3
Query: 3 VAMCEDECTDSGDDCSSK-------TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLK 161
V C +C G S + TG DC CP C G C D R VC+
Sbjct: 463 VRSCPGDCRGRGRCESGRCMCWPGYTGRDCGTR----ACPGDCRGRGRCVDGRCVCNPGF 518
Query: 162 ERGDCDKMDDRVCRKTC-GH 218
DC R C C GH
Sbjct: 519 TGEDC---GSRRCPGDCRGH 535
Score = 28.9 bits (63), Expect = 3.9
Identities = 22/80 (27%), Positives = 27/80 (33%), Gaps = 10/80 (12%)
Frame = +3
Query: 12 CEDECTDSGDDCSSK-------TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERG 170
C D+C D G + TG C + CP C G C VC
Sbjct: 187 CPDDCNDQGRCVRGRCVCFPGYTGPSCG----WPSCPGDCQGRGRCVQGVCVCRAGFSGP 242
Query: 171 DCDKMDDRVCRKTC---GHC 221
DC + R C + C G C
Sbjct: 243 DCSQ---RSCPRGCSQRGRC 259
>sp|Q05546|TENR_RAT Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural
recognition molecule J1-160/180)
Length = 1356
Score = 35.4 bits (80), Expect = 0.042
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 15/83 (18%)
Frame = +3
Query: 18 DECTD--SGDDCSSK---TGEDCTLEDVYT-------KCPKSCHFCGDCADSRPVCDVLK 161
D+C++ DCSS+ +C E+ YT +CP C G CA+ +C
Sbjct: 228 DDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGY 287
Query: 162 ERGDCDKMDDRVCRKTC---GHC 221
DC + R C C GHC
Sbjct: 288 AGEDCSQ---RRCLNACSGRGHC 307
Score = 31.2 bits (69), Expect = 0.79
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
C D C S+ +G+DC+ +CP C G C D VC+ DC ++
Sbjct: 214 CVDGQCICDSEYSGDDCS----ELRCPTDCSSRGLCVDGECVCEEPYTGEDCREL 264
>sp|Q8BYI9|TENR_MOUSE Tenascin-R precursor (TN-R) (Restrictin) (Janusin) (Neural
recognition molecule J1-160/180)
Length = 1358
Score = 35.4 bits (80), Expect = 0.042
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 15/83 (18%)
Frame = +3
Query: 18 DECTD--SGDDCSSK---TGEDCTLEDVYT-------KCPKSCHFCGDCADSRPVCDVLK 161
D+C++ DCSS+ +C E+ YT +CP C G CA+ +C
Sbjct: 228 DDCSELRCPTDCSSRGLCVDGECVCEEPYTGEDCRELRCPGDCSGKGQCANGTCLCQEGY 287
Query: 162 ERGDCDKMDDRVCRKTC---GHC 221
DC + R C C GHC
Sbjct: 288 AGEDCSQ---RRCLNACSGRGHC 307
Score = 31.2 bits (69), Expect = 0.79
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
C D C S+ +G+DC+ +CP C G C D VC+ DC ++
Sbjct: 214 CVDGQCICDSEYSGDDCS----ELRCPTDCSSRGLCVDGECVCEEPYTGEDCREL 264
>sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C) (P230)
Length = 1746
Score = 35.0 bits (79), Expect = 0.054
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 54 KTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC---GHC 221
+TGEDC+ +CP CH G C R C+ + DC +M C C G C
Sbjct: 429 RTGEDCS----QLRCPNDCHGRGRCVQGRCECEHGFQGYDCSEMS---CPHDCHQHGRC 480
Score = 32.7 bits (73), Expect = 0.27
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 60 GEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
G DC+ +CP CH G C D R CD E DC ++
Sbjct: 369 GADCSER----RCPSDCHNRGRCLDGRCECDDGFEGEDCGEL 406
Score = 32.3 bits (72), Expect = 0.35
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Frame = +3
Query: 12 CEDE---CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCD 179
C +E C D C GEDC C +CH G C ++ VCD DC
Sbjct: 256 CSEEHGRCVDGRCVCQEGFAGEDCN----EPLCLHNCHGRGRCVENECVCDEGFTGEDCG 311
Query: 180 KMDDRVCRKTC---GHC 221
++ +C K C G C
Sbjct: 312 EL---ICPKDCFDRGRC 325
Score = 31.6 bits (70), Expect = 0.60
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 93 KCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC 212
+CP +CH G C D + VC+ DC ++ C C
Sbjct: 189 ECPSNCHLRGQCVDGQCVCNEGFTGEDCSQL---ACPSDC 225
Score = 31.6 bits (70), Expect = 0.60
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTC---GHC 221
TGEDC +CP C G C D R VC+ DC D C C G C
Sbjct: 492 TGEDCR----ELRCPGDCSQRGRCVDGRCVCEHGFAGPDC---ADLACPSDCHGRGRC 542
Score = 31.2 bits (69), Expect = 0.79
Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 11/82 (13%)
Frame = +3
Query: 9 MCEDECTDSGDDCSSKT--------GEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKE 164
+C +C D G C + T GEDC CP C G C + + VCD
Sbjct: 314 ICPKDCFDRGR-CINGTCYCDEGFEGEDCGR----LACPHGCRGRGRCEEGQCVCDEGFA 368
Query: 165 RGDCDKMDDRVCRKTC---GHC 221
DC +R C C G C
Sbjct: 369 GADC---SERRCPSDCHNRGRC 387
Score = 31.2 bits (69), Expect = 0.79
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 24 CTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
C D +C GEDC +CP C G C + + VCD + DC ++
Sbjct: 387 CLDGRCECDDGFEGEDCG----ELRCPGGCSGHGRCVNGQCVCDEGRTGEDCSQL 437
Score = 30.8 bits (68), Expect = 1.0
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 57 TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRVCRKTCGH 218
TG+DC +CP CH G C D + VC DC + R C C +
Sbjct: 554 TGKDCGQR----RCPGDCHGQGRCVDGQCVCHEGFTGLDCGQ---RSCPNDCSN 600
Score = 30.0 bits (66), Expect = 1.8
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +3
Query: 21 ECTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKMDDRV 197
+C D C+ TGEDC+ CP C+ G C + VC DC + V
Sbjct: 199 QCVDGQCVCNEGFTGEDCS----QLACPSDCNDQGKCVNGVCVCFEGYSGVDCSRETCPV 254
Query: 198 -CRKTCGHC 221
C + G C
Sbjct: 255 PCSEEHGRC 263
Score = 29.6 bits (65), Expect = 2.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +3
Query: 15 EDECT-DSGDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
E+EC D G TGEDC CPK C G C + CD E DC ++
Sbjct: 296 ENECVCDEGF-----TGEDCG----ELICPKDCFDRGRCINGTCYCDEGFEGEDCGRL 344
Score = 29.3 bits (64), Expect = 3.0
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +3
Query: 12 CEDECTDSGDDCSSKTGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
CE E G DCS + CP CH G C + VCD DC ++
Sbjct: 454 CECEHGFQGYDCSEMS------------CPHDCHQHGRCVNGMCVCDDGYTGEDCREL 499
Score = 27.7 bits (60), Expect = 8.7
Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 1/58 (1%)
Frame = +3
Query: 15 EDECTDSGDDCSSK-TGEDCTLEDVYTKCPKSCHFCGDCADSRPVCDVLKERGDCDKM 185
+ C D C TG DC CP C G C R +C+ DC ++
Sbjct: 570 QGRCVDGQCVCHEGFTGLDCGQRS----CPNDCSNWGQCVSGRCICNEGYSGEDCSQV 623
>sp|P98163|YL_DROME Putative vitellogenin receptor precursor (Yolkless protein) (YL)
Length = 1984
Score = 32.7 bits (73), Expect = 0.27
Identities = 22/63 (34%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Frame = +3
Query: 30 DSGDDCSSKTGED-CTLEDVYTKCPKSCHFC--GDCADSRPVCDVLKERGDCDKMDDRVC 200
D+ DC + E C D KC H C G C DS VCD + G D D+ +C
Sbjct: 1095 DNRKDCHDHSDEQHCEKFDKSKKCHVHQHGCDNGKCVDSSLVCDGTNDCG--DNSDELLC 1152
Query: 201 RKT 209
T
Sbjct: 1153 EAT 1155
Score = 31.6 bits (70), Expect = 0.60
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = +3
Query: 18 DECTDSGDDCSSKTGEDCTLEDVYTKCPKSCHFC--GDCADSRP-VCDVLKERGDCDKMD 188
D D DC+ K+ E + CP H C G C + VCD + + G D D
Sbjct: 201 DFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCANGRCLRRKQWVCDGVDDCG--DGSD 258
Query: 189 DRVCRKTC 212
+R C C
Sbjct: 259 ERGCLNLC 266
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 precursor
(Megalin) (Glycoprotein 330) (gp330)
Length = 4655
Score = 32.3 bits (72), Expect = 0.35
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 15 EDECTDSGDDCSSKTGEDCTLEDVYTKCPK--SCHFCGDCADSRPVCDVLKERGDCDKMD 188
ED+C D+GD+ ++G DV+ P+ SC G C VCD + DC +
Sbjct: 244 EDDCKDNGDEDGCESGP----HDVHKCSpreWSCPESGRCISIYKVCDGIL---DCPGRE 296
Query: 189 DRVCRKTCGHC 221
D T +C
Sbjct: 297 DENNTSTGKYC 307
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,415,182
Number of Sequences: 369166
Number of extensions: 594188
Number of successful extensions: 2215
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 68,354,980
effective HSP length: 58
effective length of database: 57,640,350
effective search space used: 1729210500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)