Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_002_A13
(384 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05661|MYSA_DROME Myosin heavy chain, muscle 133 1e-31
sp|P24733|MYS_AEQIR Myosin heavy chain, striated muscle 127 8e-30
sp|P02566|MYO4_CAEEL Myosin-4 (Myosin heavy chain B) (MHC B... 120 7e-28
sp|P12844|MYO3_CAEEL Myosin-3 (Myosin heavy chain A) (MHC A) 116 1e-26
sp|P13533|MYH6_HUMAN Myosin heavy chain, cardiac muscle alp... 108 3e-24
sp|P79293|MYH7_PIG Myosin heavy chain, cardiac muscle beta ... 108 3e-24
sp|P13539|MYH6_MESAU Myosin heavy chain, cardiac muscle alp... 108 5e-24
sp|P12847|MYH3_RAT Myosin heavy chain, fast skeletal muscle... 108 5e-24
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 108 5e-24
sp|P12883|MYH7_HUMAN Myosin heavy chain, cardiac muscle bet... 107 8e-24
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle
Length = 1962
Score = 133 bits (334), Expect = 1e-31
Identities = 68/128 (53%), Positives = 92/128 (71%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S AAKRKLE++L + SDL+E NEA+ + E+AKKA+ D++RL DE+ EQ+HAQ
Sbjct: 1719 NASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQ 1778
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+K++K L Q KELQ +LDE+E NA+ EQRVRELE+ELD EQ+RH + QKN
Sbjct: 1779 EKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKN 1838
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1839 LRKSERRV 1846
Score = 52.4 bits (124), Expect = 3e-07
Identities = 30/118 (25%), Positives = 59/118 (50%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRL 201
K+K + +++ ++ D+E+ ++A + L DEI H+ E +++K KK
Sbjct: 939 KKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQ 998
Query: 202 GAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIE 375
G N++ +L +E+ + EQ + ELE L+ E+K + +K+ RK+E
Sbjct: 999 GETNQKTGEELQAAEDK-INHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVE 1055
Score = 50.1 bits (118), Expect = 2e-06
Identities = 31/119 (26%), Positives = 54/119 (45%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLG 204
R +L ++ EE + + K + L D+IG + +I+K +KRL
Sbjct: 1474 RNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLE 1533
Query: 205 AQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
A+ ELQA L+E+E A+ + + ++ E+D + E +NTRK +R
Sbjct: 1534 AEKDELQAALEEAE-AALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQR 1591
Score = 48.5 bits (114), Expect = 5e-06
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHE-QEHAQQIDKIKK 195
A+++LEA+ +Q+ LEEA Q + +A + S++ EI QE ++ + +K
Sbjct: 1528 ARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRK 1587
Query: 196 RLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIE 375
+QA L E+E E + ELE LD K + E QKN ++ +
Sbjct: 1588 NHQRALDSMQASL-EAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQ 1646
Query: 376 RRL 384
++L
Sbjct: 1647 QQL 1649
Score = 35.8 bits (81), Expect = 0.031
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +1
Query: 40 DLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHA-----QQIDKIKKRLG 204
+L A +LEE RQA +A+K AD +R +E+G E A QI+ KKR
Sbjct: 1109 ELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKR-E 1167
Query: 205 AQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERRL 384
A+ +L+ L+E+ V E+ ++D K + + + + L
Sbjct: 1168 AELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEHDRQTCHNEL 1227
Score = 30.4 bits (67), Expect = 1.3
Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 14/140 (10%)
Frame = +1
Query: 4 SSFVAAKRKLEADLAAMQSDLEEASNEARQANE---QAKKAVADSSRLFDE--------I 150
+ F A+K+KL + + + LEEA ++ Q ++ + D+ RL DE +
Sbjct: 1270 NDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLL 1329
Query: 151 GHEQEHAQQIDKIKKRLGAQ---NKELQAKLDESENNAMXXXXXXXXXXEQRVRELESEL 321
G + +D +++++ + +LQ +L ++ A R ELE
Sbjct: 1330 GKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAK 1389
Query: 322 DAEQKRHVETQKNTRKIERR 381
Q R E ++ + ++
Sbjct: 1390 RKLQARLAEAEETIESLNQK 1409
Score = 28.1 bits (61), Expect = 6.5
Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Frame = +1
Query: 103 QAKKAVADSSRLFDEIGHEQEHAQQID-------KIKKRLGAQNKELQAKLDESENNAMX 261
Q K + + SR+ DEI +E A++ + K++K L A N +L A E A+
Sbjct: 833 QKVKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLA-----EKTALL 887
Query: 262 XXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERRL 384
Q +E ++L A QK +E Q R I+ RL
Sbjct: 888 DSLSGEKGALQDYQERNAKLTA-QKNDLENQ--LRDIQERL 925
>sp|P24733|MYS_AEQIR Myosin heavy chain, striated muscle
Length = 1938
Score = 127 bits (319), Expect = 8e-30
Identities = 64/127 (50%), Positives = 89/127 (70%)
Frame = +1
Query: 4 SSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQID 183
SS KRKLE D+ AMQ+DL+E E + A+E+ KKA+AD++RL DE+ EQ+H+ Q++
Sbjct: 1718 SSVQGQKRKLEGDINAMQTDLDEMHGELKGADERCKKAMADAARLADELRAEQDHSNQVE 1777
Query: 184 KIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNT 363
K++K L +Q KE Q +LDE+E +++ E RV ELE+ELD EQ+RH ETQKN
Sbjct: 1778 KVRKNLESQVKEFQIRLDEAEASSLKGGKKMIQKLESRVHELEAELDNEQRRHAETQKNM 1837
Query: 364 RKIERRL 384
RK +RRL
Sbjct: 1838 RKADRRL 1844
Score = 56.6 bits (135), Expect = 2e-08
Identities = 36/121 (29%), Positives = 60/121 (49%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRL 201
K+K+EAD A ++ D+ + N ++A + S L EI + EH +++K KK L
Sbjct: 937 KKKMEADNANLKKDIGDLENTLQKAEQDKAHKDNQISTLQGEISQQDEHIGKLNKEKKAL 996
Query: 202 GAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
NK+ L ++E + EQ + ELE L+ E+K + +K RK+E+
Sbjct: 997 EEANKKTSDSL-QAEEDKCNHLNKLKAKLEQALDELEDNLEREKKVRGDVEKAKRKVEQD 1055
Query: 382 L 384
L
Sbjct: 1056 L 1056
Score = 46.6 bits (109), Expect = 2e-05
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHE-QEHAQQIDKIKK 195
A+R+LE + +Q+ LEEA Q + +A + + + +EI QE ++ D ++
Sbjct: 1526 ARRRLEMEKEELQAALEEAEGALEQEEAKVMRAQLEIATVRNEIDKRIQEKEEEFDNTRR 1585
Query: 196 RLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIE 375
+ +QA L E+E EQ + ELE LDA + E +K ++ +
Sbjct: 1586 NHQRALESMQASL-EAEAKGKADAMRIKKKLEQDINELEVALDASNRGKAEMEKTVKRYQ 1644
Query: 376 RRL 384
+++
Sbjct: 1645 QQI 1647
Score = 43.1 bits (100), Expect = 2e-04
Identities = 27/119 (22%), Positives = 54/119 (45%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLG 204
R A+L +++ +EE + + K + L D++ ++DK ++RL
Sbjct: 1472 RGYSAELYRIKASIEEYQDSIGALRRENKNLADEIHDLTDQLSEGGRSTHELDKARRRLE 1531
Query: 205 AQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
+ +ELQA L+E+E A+ + + + +E+D + E NTR+ +R
Sbjct: 1532 MEKEELQAALEEAE-GALEQEEAKVMRAQLEIATVRNEIDKRIQEKEEEFDNTRRNHQR 1589
Score = 42.0 bits (97), Expect = 4e-04
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEAS-NEARQANEQAKKAVADSSRLFDEIGHEQEHAQQ 177
+S+ + +K EA+L ++ DLEEAS Q + KK ++ + D++ Q
Sbjct: 1154 TSAQIELNKKREAELLKIRRDLEEASLQHEAQISALRKKHQDAANEMADQV-------DQ 1206
Query: 178 IDKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQK 357
+ K+K +L K+L+ ++D+ E+ M E+ +++ ES++ R ++Q+
Sbjct: 1207 LQKVKSKLEKDKKDLKREMDDLESQ-MTHNMKNKGCSEKVMKQFESQMSDLNARLEDSQR 1265
Query: 358 NTRKIE 375
+ +++
Sbjct: 1266 SINELQ 1271
Score = 34.3 bits (77), Expect = 0.090
Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHA-----QQIDK 186
+RK++ +L A +LEE R A + +K A+ +R +E+G + A QI+
Sbjct: 1102 QRKIK-ELQARIEELEEELEAERNARAKVEKQRAELNRELEELGERLDEAGGATSAQIEL 1160
Query: 187 IKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTR 366
KKR A+ +++ L+E+ + E+ ++D QK + +K+ +
Sbjct: 1161 NKKR-EAELLKIRRDLEEASLQHEAQISALRKKHQDAANEMADQVDQLQKVKSKLEKDKK 1219
Query: 367 KIERRL 384
++R +
Sbjct: 1220 DLKREM 1225
Score = 27.7 bits (60), Expect = 8.5
Identities = 18/121 (14%), Positives = 47/121 (38%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRL 201
K +L + L + LEE + + + + AD + +++ EQE + + +
Sbjct: 1302 KSQLSSQLEDARRSLEEETRARSKLQNEVRNMHADMDAIREQLEEEQESKSDVQRQLSKA 1361
Query: 202 GAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
+ ++ ++K + N ++ E E +A + +K ++++
Sbjct: 1362 NNEIQQWRSKFESEGANRTEELEDQKRKLLGKLSEAEQTTEAANAKCSALEKAKSRLQQE 1421
Query: 382 L 384
L
Sbjct: 1422 L 1422
>sp|P02566|MYO4_CAEEL Myosin-4 (Myosin heavy chain B) (MHC B) (Uncoordinated protein 54)
Length = 1966
Score = 120 bits (302), Expect = 7e-28
Identities = 60/127 (47%), Positives = 88/127 (69%)
Frame = +1
Query: 4 SSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQID 183
SS +AKRKLE ++ A+ +DL+E NE + A E++KKA+AD++RL +E+ EQEH+Q +D
Sbjct: 1733 SSLTSAKRKLEGEIQAIHADLDETLNEYKAAEERSKKAIADATRLAEELRQEQEHSQHVD 1792
Query: 184 KIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNT 363
+++K L Q KE+Q +LDE+E A+ EQRVRELESELD EQ+R + KN
Sbjct: 1793 RLRKGLEQQLKEIQVRLDEAEAAALKGGKKVIAKLEQRVRELESELDGEQRRFQDANKNL 1852
Query: 364 RKIERRL 384
+ +RR+
Sbjct: 1853 GRADRRV 1859
Score = 43.1 bits (100), Expect = 2e-04
Identities = 30/109 (27%), Positives = 51/109 (46%)
Frame = +1
Query: 55 QSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLGAQNKELQAKL 234
Q +L E R+ N+ + + D L D++G ++ KI +RL + +ELQ L
Sbjct: 1500 QEELAEVVEGLRRENKSLSQEIKD---LTDQLGEGGRSVHEMQKIIRRLEIEKEELQHAL 1556
Query: 235 DESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
DE+E A+ + V ++ SE++ + E +NTRK R
Sbjct: 1557 DEAE-AALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENTRKNHAR 1604
Score = 40.0 bits (92), Expect = 0.002
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHE-QEHAQQIDKIKKRL 201
R+LE + +Q L+EA + +A + S++ EI QE ++ + +K
Sbjct: 1543 RRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENTRKNH 1602
Query: 202 GAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
+ +QA L E+E E + ELE LD K + + QKN ++ + +
Sbjct: 1603 ARALESMQASL-ETEAKGKAELLRIKKKLEGDINELEIALDHANKANADAQKNLKRYQEQ 1661
Query: 382 L 384
+
Sbjct: 1662 V 1662
Score = 38.9 bits (89), Expect = 0.004
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +1
Query: 58 SDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEH-----AQQIDKIKKRLGAQNKEL 222
S+LEE RQ+ +A +A +D R +E+G + + A Q++ KKR A+ +L
Sbjct: 1128 SELEEELENERQSRSKADRAKSDLQRELEELGEKLDEQGGATAAQVEVNKKR-EAELAKL 1186
Query: 223 QAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIER 378
+ L+E+ N V EL +LD K + +K+ + R
Sbjct: 1187 RRDLEEANMNHENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVR 1238
Score = 38.9 bits (89), Expect = 0.004
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Frame = +1
Query: 34 EADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQID---------- 183
EA L A +S + A E Q + +K + + F+ + HA+ ++
Sbjct: 1560 EAALEAEESKVLRAQVEVSQIRSEIEKRIQEKEEEFENT--RKNHARALESMQASLETEA 1617
Query: 184 -------KIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRH 342
+IKK+L EL+ LD + N A +++VREL+ +++ EQ+
Sbjct: 1618 KGKAELLRIKKKLEGDINELEIALDHA-NKANADAQKNLKRYQEQVRELQLQVEEEQRNG 1676
Query: 343 VETQKNTRKIERR 381
+T++ E+R
Sbjct: 1677 ADTREQFFNAEKR 1689
Score = 34.3 bits (77), Expect = 0.090
Identities = 24/111 (21%), Positives = 46/111 (41%)
Frame = +1
Query: 52 MQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLGAQNKELQAK 231
+ DL+ ++ N+ K L D + E+ +DK K+++ + K Q
Sbjct: 1018 LMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELKIAQEN 1077
Query: 232 LDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERRL 384
+DES E +++ ESEL + R + Q K++R++
Sbjct: 1078 IDESGRQ--------RHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQI 1120
>sp|P12844|MYO3_CAEEL Myosin-3 (Myosin heavy chain A) (MHC A)
Length = 1969
Score = 116 bits (291), Expect = 1e-26
Identities = 58/127 (45%), Positives = 85/127 (66%)
Frame = +1
Query: 4 SSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQID 183
S+ +RKLE +L A ++LEE +NE + A EQ +KA AD++RL +E+ EQEH+ I+
Sbjct: 1734 SALTGQRRKLEGELLAAHAELEEIANELKNAVEQGQKASADAARLAEELRQEQEHSMHIE 1793
Query: 184 KIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNT 363
+I+K L Q KE+Q +LD++EN A+ E R+R +E ELD EQ+RH +T+KN
Sbjct: 1794 RIRKGLELQIKEMQIRLDDAENAALKGGKKIIAQLEARIRAIEQELDGEQRRHQDTEKNW 1853
Query: 364 RKIERRL 384
RK ERR+
Sbjct: 1854 RKAERRV 1860
Score = 48.1 bits (113), Expect = 6e-06
Identities = 28/118 (23%), Positives = 60/118 (50%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRL 201
K+K + +L+ + +++ R+A ++ + + L DE+ ++ E +++K KK
Sbjct: 953 KKKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHNIRSLQDEMANQDEAVAKLNKEKKHQ 1012
Query: 202 GAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIE 375
N++L L +SE + + EQ++ ELE +D E++ + +K RK+E
Sbjct: 1013 EESNRKLNEDL-QSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKRKVE 1069
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/119 (23%), Positives = 54/119 (45%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLG 204
R+L DL ++ +E + + K + L D++G ++ KI ++L
Sbjct: 1488 RQLSTDLFKAKTANDELAEYLDSTRRENKSLAQEVKDLTDQLGEGGRSVAELQKIVRKLE 1547
Query: 205 AQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
+ +ELQ LDE+E A+ + V ++ SE++ + E +NTR+ +R
Sbjct: 1548 VEKEELQKALDEAE-AALEAEEAKVLRAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQR 1605
Score = 32.7 bits (73), Expect = 0.26
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHE-QEHAQQIDKIKKR 198
K+KLE+D+ +DLE A + A +A A+K + E+ + +E +Q D+I+++
Sbjct: 1628 KKKLESDI----NDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIREQ 1683
Query: 199 LGAQNKE---LQAKLDESENNA 255
A K LQ++ DE A
Sbjct: 1684 FLASEKRNAILQSEKDELAQQA 1705
>sp|P13533|MYH6_HUMAN Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha)
Length = 1939
Score = 108 bits (271), Expect = 3e-24
Identities = 55/128 (42%), Positives = 85/128 (66%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S + K+K+EADL +QS++EEA E R A E+AKKA+ D++ + +E+ EQ+ + +
Sbjct: 1722 NTSLINQKKKMEADLTQLQSEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHL 1781
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+++KK + K+LQ +LDE+E A+ E RVRELE EL+AEQKR+ E+ K
Sbjct: 1782 ERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELEGELEAEQKRNAESVKG 1841
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1842 MRKSERRI 1849
Score = 47.8 bits (112), Expect = 8e-06
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKR 198
AKRKLE DL Q + + N+ Q E+ KK D ++ +I EQ A Q+ K K
Sbjct: 1053 AKRKLEGDLKLTQESIMDLENDKLQLEEKLKKKEFDINQQNSKIEDEQALALQLQKKLKE 1112
Query: 199 LGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELES-----------ELDAEQKRHV 345
A+ +EL+ +L E+E A + + E+ +++ +KR
Sbjct: 1113 NQARIEELEEEL-EAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 1171
Query: 346 ETQKNTRKIE 375
E QK R +E
Sbjct: 1172 EFQKMRRDLE 1181
Score = 37.0 bits (84), Expect = 0.014
Identities = 29/116 (25%), Positives = 54/116 (46%)
Frame = +1
Query: 13 VAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIK 192
+ +K EA+ M+ DLEEA+ + +K ADS E+G E + ++K
Sbjct: 1163 IEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADS---VAELG---EQIDNLQRVK 1216
Query: 193 KRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
++L + E + +LD+ +N M E+ R LE + + + + E Q++
Sbjct: 1217 QKLEKEKSEFKLELDDVTSN-MEQIIKAKANLEKVSRTLEDQANEYRVKLEEAQRS 1271
>sp|P79293|MYH7_PIG Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
Length = 1935
Score = 108 bits (271), Expect = 3e-24
Identities = 54/128 (42%), Positives = 88/128 (68%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S + K+K+EADL+ +Q+++EEA E+R A E+AKKA+ D++ + +E+ EQ+ + +
Sbjct: 1720 NTSLINQKKKMEADLSQLQTEVEEAVQESRNAEEKAKKAITDAAMMAEELKKEQDTSAHL 1779
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+++KK + K+LQ +LDE+E A+ E RVRELE+EL+AEQKR+ E+ K
Sbjct: 1780 ERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKG 1839
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1840 MRKSERRI 1847
Score = 49.7 bits (117), Expect = 2e-06
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKR 198
AKRKLE DL Q + + N+ +Q +E+ KK + + L I EQ Q+ K K
Sbjct: 1051 AKRKLEGDLKLTQESIMDLENDKQQLDERLKKKDFELNALNARIEDEQALGSQLQKKLKE 1110
Query: 199 LGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELES-----------ELDAEQKRHV 345
L A+ +EL+ +L E+E A + + E+ +++ +KR
Sbjct: 1111 LQARIEELEEEL-EAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 1169
Query: 346 ETQKNTRKIE 375
E QK R +E
Sbjct: 1170 EFQKMRRDLE 1179
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/120 (25%), Positives = 57/120 (47%)
Frame = +1
Query: 13 VAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIK 192
+ +K EA+ M+ DLEEA+ + +K ADS E+G E + ++K
Sbjct: 1161 IEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADS---VAELG---EQIDNLQRVK 1214
Query: 193 KRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKI 372
++L + E + +LD+ +N M E+ R LE +++ + + ETQ++ +
Sbjct: 1215 QKLEKEKSEFKLELDDVTSN-MEQIIKAKANLEKMCRTLEDQMNEHRSKAEETQRSVNDL 1273
Score = 42.7 bits (99), Expect = 3e-04
Identities = 25/117 (21%), Positives = 56/117 (47%), Gaps = 10/117 (8%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLG 204
R L +L +++ EE+ + + K + S L +++G + +++K++K+L
Sbjct: 1475 RSLSTELFKLKNAYEESLEHLETSKRENKNLQEEISDLTEQLGSSGKTIHELEKVRKQLE 1534
Query: 205 AQNKELQAKLDESENN----------AMXXXXXXXXXXEQRVRELESELDAEQKRHV 345
A+ ELQ+ L+ESE + A E+++ E + E++ ++ H+
Sbjct: 1535 AEKLELQSALEESEASLEHEEGKILRAQLEFNQIKAEMERKLAEKDEEMEQAKRNHL 1591
>sp|P13539|MYH6_MESAU Myosin heavy chain, cardiac muscle alpha isoform (MyHC-alpha)
Length = 1939
Score = 108 bits (269), Expect = 5e-24
Identities = 54/128 (42%), Positives = 86/128 (67%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S + K+K+EADL +Q+++EEA E R A E+AKKA+ D++ + +E+ EQ+ + +
Sbjct: 1722 NTSLINQKKKMEADLTQLQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHL 1781
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+++KK + K+LQ +LDE+E A+ E RVRELE+EL+AEQKR+ E+ K
Sbjct: 1782 ERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKG 1841
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1842 MRKSERRI 1849
Score = 48.5 bits (114), Expect = 5e-06
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 11/130 (8%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKR 198
AKRKLE DL Q + + N+ Q E+ KK D S+ +I EQ A Q+ K K
Sbjct: 1053 AKRKLEGDLNVTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIEDEQALALQLQKKLKE 1112
Query: 199 LGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELES-----------ELDAEQKRHV 345
A+ +EL+ +L E+E A + + E+ +++ +KR
Sbjct: 1113 NQARIEELEEEL-EAERTARAKVEKLRSDLTRELEEISERLEEAGGATSVQIEMNKKREA 1171
Query: 346 ETQKNTRKIE 375
E QK R +E
Sbjct: 1172 EFQKMRRDLE 1181
Score = 37.4 bits (85), Expect = 0.011
Identities = 29/116 (25%), Positives = 55/116 (47%)
Frame = +1
Query: 13 VAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIK 192
+ +K EA+ M+ DLEEA+ + +K ADS E+G E + ++K
Sbjct: 1163 IEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADS---VAELG---EQIDNLQRVK 1216
Query: 193 KRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
++L + E + +LD+ +N M E+ R LE + + + + E+Q++
Sbjct: 1217 QKLEKEKSEFKLELDDVTSN-MEQIIKAKANLEKVSRTLEDQANEYRVKLEESQRS 1271
>sp|P12847|MYH3_RAT Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 108 bits (269), Expect = 5e-24
Identities = 54/128 (42%), Positives = 85/128 (66%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S + K+KLE DL +QS++E+AS +AR A E+AKKA+ D++ + +E+ EQ+ + +
Sbjct: 1721 NTSLIHTKKKLETDLTQLQSEVEDASRDARNAEEKAKKAITDAAMMAEELKKEQDTSAHL 1780
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+++KK L K+LQ +LDE+E A+ E R+RELE EL+ EQKR+ E+ K
Sbjct: 1781 ERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLETRIRELEFELEGEQKRNTESVKG 1840
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1841 LRKYERRV 1848
Score = 46.6 bits (109), Expect = 2e-05
Identities = 29/125 (23%), Positives = 61/125 (48%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++ A KRKLE + + ++ D+++ + ++ L +E+ E ++
Sbjct: 934 NAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEELAGLDETIAKL 993
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+ KK L +++ L ++E + + EQ+V +LES L+ E+K V+ ++N
Sbjct: 994 TREKKALQEAHQQTLDDL-QAEEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERN 1052
Query: 361 TRKIE 375
RK+E
Sbjct: 1053 KRKLE 1057
Score = 46.2 bits (108), Expect = 2e-05
Identities = 35/121 (28%), Positives = 54/121 (44%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRL 201
KRKLE DL Q + + N+ +Q +E+ KK + S+L ++ EQ + Q+ K
Sbjct: 1053 KRKLEGDLKLAQESILDLENDKQQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQK----- 1107
Query: 202 GAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIERR 381
+ KELQA R+ ELE E++AE+ +T+K R
Sbjct: 1108 --KIKELQA----------------------RIEELEEEIEAERATRAKTEKQRSDYARE 1143
Query: 382 L 384
L
Sbjct: 1144 L 1144
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/127 (23%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
+S+ + +K EA+ ++ DLEEA+ + +K ADS+ E A+QI
Sbjct: 1158 TSTQIELNKKREAEFLKLRRDLEEATLQHEATVATLRKKHADSA---------AELAEQI 1208
Query: 181 D---KIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVET 351
D ++K++L + E + ++D+ ++++ E+ R LE +L + ++ ET
Sbjct: 1209 DNLQRVKQKLEKEKSEFKLEIDDL-SSSVESVSKSKANLEKICRTLEDQLSEARGKNEET 1267
Query: 352 QKNTRKI 372
Q++ ++
Sbjct: 1268 QRSLSEL 1274
Score = 37.0 bits (84), Expect = 0.014
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 11/133 (8%)
Frame = +1
Query: 4 SSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVAD----SSRLFDEIG------ 153
SS V + K +A+L + LE+ +EAR NE+ ++++++ SRL E G
Sbjct: 1233 SSSVESVSKSKANLEKICRTLEDQLSEARGKNEETQRSLSELTTQKSRLQTEAGELSRQL 1292
Query: 154 -HEQEHAQQIDKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAE 330
++ Q+ + K+ Q +EL+ +L+E EN A L + + E
Sbjct: 1293 EEKESIVSQLSRSKQAFTQQIEELKRQLEE-ENKAKNALAHALQSSRHDCDLLREQYEEE 1351
Query: 331 QKRHVETQKNTRK 369
Q+ E Q+ K
Sbjct: 1352 QEGKAELQRALSK 1364
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 108 bits (269), Expect = 5e-24
Identities = 54/128 (42%), Positives = 84/128 (65%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S + K+KLE+D++ +QS++E+ EAR A E+AKKA+ D++ + +E+ EQ+ + +
Sbjct: 1725 NTSLINTKKKLESDISQIQSEMEDTIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHL 1784
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+++KK L K+LQ +LDE+E A+ E RVRELE E+DAEQKR E K
Sbjct: 1785 ERMKKNLDQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVDAEQKRSAEAVKG 1844
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1845 VRKYERRV 1852
Score = 50.4 bits (119), Expect = 1e-06
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKR 198
AKRKLE DL Q + N+ +Q +E+ KK + S++ +I EQ Q+ K K
Sbjct: 1056 AKRKLEGDLKMTQESTMDLENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKE 1115
Query: 199 LGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELE-----------SELDAEQKRHV 345
L A+ +EL+ ++ E+E + + + E+ +++D +KR
Sbjct: 1116 LQARIEELEEEI-EAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMNKKREA 1174
Query: 346 ETQKNTRKIE 375
E QK R +E
Sbjct: 1175 EFQKMRRDLE 1184
Score = 42.0 bits (97), Expect = 4e-04
Identities = 30/116 (25%), Positives = 55/116 (47%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLG 204
+K EA+ M+ DLEEA+ + +K ADS+ ++G E + ++K++L
Sbjct: 1170 KKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTA---DVG---EQIDNLQRVKQKLE 1223
Query: 205 AQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKI 372
+ EL+ ++D+ +N M E+ R LE +L + + E Q+ I
Sbjct: 1224 KEKSELKMEIDDLASN-MESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDI 1278
Score = 38.9 bits (89), Expect = 0.004
Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Frame = +1
Query: 25 RKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKRLG 204
R L +L M++ EE+ + + K + S L ++I + +++K+KK++
Sbjct: 1480 RSLSTELFKMKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKKQIE 1539
Query: 205 AQNKELQAKLDESENN----------AMXXXXXXXXXXEQRVRELESELDAEQKRH---V 345
+ ELQ L+E+E + ++++ E + E+D ++ H V
Sbjct: 1540 QEKSELQTALEEAEASLEHEEGKILRVQLELNQVKSDIDRKIAEKDEEIDQLKRNHLRVV 1599
Query: 346 ETQKNTRKIERR 381
++ ++T E R
Sbjct: 1600 DSMQSTLDAEIR 1611
>sp|P12883|MYH7_HUMAN Myosin heavy chain, cardiac muscle beta isoform (MyHC-beta)
Length = 1935
Score = 107 bits (267), Expect = 8e-24
Identities = 53/128 (41%), Positives = 87/128 (67%)
Frame = +1
Query: 1 SSSFVAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQI 180
++S + K+K++ADL+ +Q+++EEA E R A E+AKKA+ D++ + +E+ EQ+ + +
Sbjct: 1720 NTSLINQKKKMDADLSQLQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHL 1779
Query: 181 DKIKKRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKN 360
+++KK + K+LQ +LDE+E A+ E RVRELE+EL+AEQKR+ E+ K
Sbjct: 1780 ERMKKNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKG 1839
Query: 361 TRKIERRL 384
RK ERR+
Sbjct: 1840 MRKSERRI 1847
Score = 50.8 bits (120), Expect = 9e-07
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Frame = +1
Query: 19 AKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIKKR 198
AKRKLE DL Q + + N+ +Q +E+ KK + + L I EQ Q+ K K
Sbjct: 1051 AKRKLEGDLKLTQESIMDLENDKQQLDERLKKKDFELNALNARIEDEQALGSQLQKKLKE 1110
Query: 199 LGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELES-----------ELDAEQKRHV 345
L A+ +EL+ +L ESE A + + E+ +++ +KR
Sbjct: 1111 LQARIEELEEEL-ESERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 1169
Query: 346 ETQKNTRKIE 375
E QK R +E
Sbjct: 1170 EFQKMRRDLE 1179
Score = 43.5 bits (101), Expect = 1e-04
Identities = 30/120 (25%), Positives = 57/120 (47%)
Frame = +1
Query: 13 VAAKRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHEQEHAQQIDKIK 192
+ +K EA+ M+ DLEEA+ + +K ADS E+G E + ++K
Sbjct: 1161 IEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADS---VAELG---EQIDNLQRVK 1214
Query: 193 KRLGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKI 372
++L + E + +LD+ +N M E+ R LE +++ + + ETQ++ +
Sbjct: 1215 QKLEKEKSEFKLELDDVTSN-MEQIIKAKANLEKMCRTLEDQMNEHRSKAEETQRSVNDL 1273
Score = 32.7 bits (73), Expect = 0.26
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 1/122 (0%)
Frame = +1
Query: 22 KRKLEADLAAMQSDLEEASNEARQANEQAKKAVADSSRLFDEIGHE-QEHAQQIDKIKKR 198
+++LEA+ +QS LEEA + +A + +++ EI + E +++++ K+
Sbjct: 1530 RKQLEAEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERKLAEKDEEMEQAKRN 1589
Query: 199 LGAQNKELQAKLDESENNAMXXXXXXXXXXEQRVRELESELDAEQKRHVETQKNTRKIER 378
LQ LD +E + E + E+E +L + E QK + ++
Sbjct: 1590 HLRVVDSLQTSLD-AETRSRNEALRVKKKMEGDLNEMEIQLSHANRMAAEAQKQVKSLQS 1648
Query: 379 RL 384
L
Sbjct: 1649 LL 1650
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.304 0.118 0.288
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,923,439
Number of Sequences: 369166
Number of extensions: 543022
Number of successful extensions: 2244
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2197
length of database: 68,354,980
effective HSP length: 94
effective length of database: 50,989,890
effective search space used: 1682666370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)