Planarian EST Database


Dr_sW_001_O14

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_001_O14
         (678 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P36059|YKP1_YEAST  Protein YKL151c                             139   5e-33
sp|P32740|YNH2_CAEEL  Hypothetical protein R107.2 in chromos...   124   2e-28
sp|P74217|Y1433_SYNY3  Hypothetical protein sll1433                74   3e-13
sp|P31806|YJEF_ECOLI  Hypothetical protein yjeF                    68   3e-11
sp|O06250|Y3433_MYCTU  Hypothetical protein Rv3433c/MT3539         57   4e-08
sp|P96051|YFOL_STRTR  Hypothetical protein in folD-pbp2B int...    54   5e-07
sp|Q58981|Y1586_METJA  Hypothetical protein MJ1586                 52   2e-06
sp|P37391|Y373_MYCLE  Hypothetical protein ML0373                  46   1e-04
sp|Q9WZR0|PYRG_THEMA  CTP synthase (UTP--ammonia ligase) (CT...    34   0.40 
sp|P36021|MOT8_HUMAN  Monocarboxylate transporter 8 (MCT 8) ...    31   3.4  
>sp|P36059|YKP1_YEAST Protein YKL151c
          Length = 337

 Score =  139 bits (351), Expect = 5e-33
 Identities = 91/222 (40%), Positives = 124/222 (55%), Gaps = 24/222 (10%)
 Frame = +1

Query: 79  KNSIPPLDAIKYKGNAG-KICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPII 255
           K  IPPL    +KG +G ++C+IGG ++YTGAPYFSA +  L G DL HVIC  +A  +I
Sbjct: 16  KRCIPPLLPKFHKGQSGGRVCIIGGCEDYTGAPYFSANATALMGCDLTHVICEYNAGTVI 75

Query: 256 KSYSPELIVHPIL-----------GTNRDECCKWLDKMHAVIIGPGLGRD--YIQESMDL 396
           KSY+P L+VHP L              R +    LD++H V+IGPGLGRD   ++   D+
Sbjct: 76  KSYTPNLMVHPYLRMSNTKLDVDMDEQRKKINSLLDRIHVVVIGPGLGRDPLMLKSIKDI 135

Query: 397 IRYVKTQ---DIPLIVDADGLHLICLDPSIVSGYK-----KAILTPNINESKMLFEKVTK 552
           IRY+  +    IPL++DADGL L+  D  +    K     + ILTPN+ E K L + + K
Sbjct: 136 IRYILEKHEGKIPLVIDADGLFLVTQDSEVKEMLKSYPKGRVILTPNVVEFKRLCDAIGK 195

Query: 553 GTTFNFDMSVCSQIACSLGNITIVAKGIHDMI--TDGTKDAI 672
               + +M   S IA  L N  +V KG  D I   D  KD +
Sbjct: 196 KGDSHSEMG--SLIAQEL-NCIVVEKGQSDKIFSPDSEKDML 234
>sp|P32740|YNH2_CAEEL Hypothetical protein R107.2 in chromosome III
          Length = 307

 Score =  124 bits (311), Expect = 2e-28
 Identities = 78/199 (39%), Positives = 107/199 (53%), Gaps = 12/199 (6%)
 Frame = +1

Query: 88  IPPLDAIKYKGNAGKICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPIIKSYS 267
           +P L     KG+ GK+ VIGGS EYTGAPYF+A SA   GADL+H+ C  DAA +IK YS
Sbjct: 8   LPKLTPHLRKGDCGKMGVIGGSLEYTGAPYFAASSASRLGADLIHIFCDPDAAQVIKGYS 67

Query: 268 PELIVHPILGTNRDECCKWLDKMHAVIIGPGLGR--DYIQESMDLIRYVKTQDIPLIVDA 441
           P+LIVHP  G   +     L +M A++IGPGLGR  +      +L  +V+ +D+P ++D 
Sbjct: 68  PDLIVHP--GMTANSIIPKLSRMDAIVIGPGLGRNPNIWPLMQELFEFVRNRDVPFVIDG 125

Query: 442 DGLHLICLD-PSIVSGYKKAILTPNINESKMLFEKVTKGTTFNFDM------SVCSQIAC 600
           DGL  +              +LTPNI E    F ++ K      D+      S    +A 
Sbjct: 126 DGLWFVSEHIEKFPRQMSATVLTPNIVE----FSRLCKSALGEEDVLNVRNNSQLQHLAA 181

Query: 601 SLG---NITIVAKGIHDMI 648
            L    N+TI  KG  D++
Sbjct: 182 ELSRKMNVTIYLKGEVDLV 200
>sp|P74217|Y1433_SYNY3 Hypothetical protein sll1433
          Length = 524

 Score = 74.3 bits (181), Expect = 3e-13
 Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 7/192 (3%)
 Frame = +1

Query: 106 IKYKGNAGKICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPIIKSYSPELIVH 285
           + +K   G + +I GS++Y G    + + A  SG  +V V  P     ++ S  PE++V 
Sbjct: 245 VTHKYQQGHLLLICGSQQYAGGALLTTLGARASGVGMVTVAVPMGIKALLHSQCPEVLVK 304

Query: 286 PILGTNRDECCKW----LDKMHAVIIGPGLGRDYIQESMDLIRYVKTQDIPLIVDADGLH 453
            +L T            L +  AV +GPGLG D       L+  V + + PLI+DADGL+
Sbjct: 305 GLLETPSGAIAGLGNLDLSRYSAVALGPGLGSDV----GPLVEEVLSVNCPLILDADGLN 360

Query: 454 LIC---LDPSIVSGYKKAILTPNINESKMLFEKVTKGTTFNFDMSVCSQIACSLGNITIV 624
            +    L P +       +LTP+  E K LF  + +G     D     Q A ++   T++
Sbjct: 361 QLAQQQLLPLLAVRTAPTVLTPHGGEFKRLFPDIDQG-----DRLTAVQTAAAMCQATVL 415

Query: 625 AKGIHDMITDGT 660
            KG   +I   T
Sbjct: 416 LKGAKTVIASPT 427
>sp|P31806|YJEF_ECOLI Hypothetical protein yjeF
          Length = 515

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 46/165 (27%), Positives = 83/165 (50%)
 Frame = +1

Query: 40  MRNLPSKALLMWMKNSIPPLDAIKYKGNAGKICVIGGSKEYTGAPYFSAISALLSGADLV 219
           ++   ++ L  W+K    P     +KG+ G++ +IGG     GA   +  +AL +GA LV
Sbjct: 230 IQRFSAEQLSHWLK----PRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEAALRAGAGLV 285

Query: 220 HVICPQDAAPIIKSYSPELIVHPILGTNRDECCKWLDKMHAVIIGPGLGRDYIQESMDLI 399
            V+   +    + +  PEL+VH +   +  E  +W D    V+IGPGLG+   +     +
Sbjct: 286 RVLTRSENIAPLLTARPELMVHELTMDSLTESLEWAD---VVVIGPGLGQQ--EWGKKAL 340

Query: 400 RYVKTQDIPLIVDADGLHLICLDPSIVSGYKKAILTPNINESKML 534
           + V+    P++ DAD L+L+ ++P         ++TP+  E+  L
Sbjct: 341 QKVENFRKPMLWDADALNLLAINP---DKRHNRVITPHPGEAARL 382
>sp|O06250|Y3433_MYCTU Hypothetical protein Rv3433c/MT3539
          Length = 473

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
 Frame = +1

Query: 115 KGNAGKICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPIIKSYSPELIVHPIL 294
           K   G   V+ GS  Y GA      +A+ + + +V       A   + ++ PE+I  P  
Sbjct: 227 KYTQGVTGVLAGSSTYPGAAVLCTGAAVAATSGMVRYAGTAHAE--VLAHWPEVIASPTP 284

Query: 295 GTNRDECCKWLDKMHAVIIGPGLGRDYIQESMDLIRYVKTQDIPLIVDADGLHLICLDPS 474
                       ++ A ++GPGLG D  +     + +    D+P++VDADGL ++   P 
Sbjct: 285 AA--------AGRVQAWVVGPGLGTD--EAGAAALWFALDTDLPVLVDADGLTMLADHPD 334

Query: 475 IVSGYK-KAILTPNINESKMLFEKVTKGTTFNFDMSVCSQIACSLGNITIVAKGIHDMIT 651
           +V+G     +LTP+  E    F ++      +  +  C Q+A +LG  T++ KG   +I 
Sbjct: 335 LVAGRNAPTVLTPHAGE----FARLAGAPPGDDRVGACRQLADALG-ATVLLKGNVTVIA 389

Query: 652 D 654
           D
Sbjct: 390 D 390
>sp|P96051|YFOL_STRTR Hypothetical protein in folD-pbp2B intergenic region (ORF1091)
          Length = 278

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
 Frame = +1

Query: 112 YKGNAGKICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPIIKSYSPELIVHPI 291
           +KG+ G++ ++GG   Y GA   +AI+ + SGA LV V   ++    + ++ PE +   +
Sbjct: 20  HKGSYGRVLLVGGLYPYGGAIIMAAIACVNSGAGLVTVATDRENIIALHAHLPEAMAFDL 79

Query: 292 LGTNRDECCKWLDKMHA---VIIGPGLGRDYIQE-SMDLIRYVKTQDIPLIVDADGLHLI 459
             T R     +LDK+ A   ++IG GLG +   + +++L+      +  L+VD   L+L+
Sbjct: 80  RETER-----FLDKLRAADVILIGSGLGEEETADWALELVLANIRSNQNLVVDGSALNLL 134

Query: 460 CLDPSIVSGYKKAILTPNINESKML 534
                        ILTP+  E + L
Sbjct: 135 AKKNQSSLPKCHLILTPHQKEWERL 159
>sp|Q58981|Y1586_METJA Hypothetical protein MJ1586
          Length = 491

 Score = 51.6 bits (122), Expect = 2e-06
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
 Frame = +1

Query: 100 DAIKYKGNAGKICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPIIKSYSPELI 279
           D+  +KG  GK+ +IGGSK++ GAP  + ++A L   DLV ++       I K   PE I
Sbjct: 244 DSNSHKGQNGKVLIIGGSKDFYGAPILAGLAA-LKIVDLVGIL--SVGKVIDKVNHPEFI 300

Query: 280 VHPILG-----TNRDECCKWLDKMHAVIIGPGLGRDYIQESMDLIRYVKTQDIPLIVDAD 444
           ++ + G      + D   +   K   V++G GLG +   ++  L  ++   D  +++DAD
Sbjct: 301 MYRVEGDYLSSQHVDYTLEIAKKYDVVVLGNGLGANNRTKAF-LNEFLAKYDGKVVIDAD 359

Query: 445 GLHLICLDPSIVSGYKKAILTPNINESKMLFEKVTKGTTFNFDMSVCSQIACSLGNITIV 624
            + +I  D +     +  I TP+  E + +            D+     I       TIV
Sbjct: 360 AIKVI--DYNNFEFSENYIFTPHKREFEYM----------GIDLDNIENI-----KSTIV 402

Query: 625 AKGIHDMI 648
            KG +D+I
Sbjct: 403 LKGKYDII 410
>sp|P37391|Y373_MYCLE Hypothetical protein ML0373
          Length = 473

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 1/181 (0%)
 Frame = +1

Query: 115 KGNAGKICVIGGSKEYTGAPYFSAISALLSGADLVHVICPQDAAPIIKSYSPELIVHPIL 294
           K   G   V+ GS  Y GA      +A+ + + +V       A   + ++ PE+I     
Sbjct: 227 KYTQGVTGVLAGSSTYPGAAVLCTGAAVAATSGMVRYA--GSAYTQVLAHWPEVIASAT- 283

Query: 295 GTNRDECCKWLDKMHAVIIGPGLGRDYIQESMDLIRYVKTQDIPLIVDADGLHLICLDPS 474
            T       W       ++GPGLG D    +   + +    D+P++VDADGL ++   P 
Sbjct: 284 PTAAGRVQSW-------VVGPGLGIDATATAA--LWFALETDLPVLVDADGLTMLAAHPD 334

Query: 475 -IVSGYKKAILTPNINESKMLFEKVTKGTTFNFDMSVCSQIACSLGNITIVAKGIHDMIT 651
            +++     +LTP+ +E    F ++      +  +  C ++A S G  T++ KG   +I 
Sbjct: 335 LVINRNAPTVLTPHASE----FARLAGTPPGDDRVGACRKLADSFG-ATVLLKGNVTVIA 389

Query: 652 D 654
           D
Sbjct: 390 D 390
>sp|Q9WZR0|PYRG_THEMA CTP synthase (UTP--ammonia ligase) (CTP synthetase)
          Length = 524

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = +1

Query: 301 NRDECCKWLDKMHAVIIGPGLGRDYIQESMDLIRYVKTQDIPLIVDADGLHLICLD-PSI 477
           N +E  K LD+  A+II  G GR  ++  +  I+Y +    P++    G+ L+ ++    
Sbjct: 323 NDEEVKKVLDEYDALIIPGGFGRRGVEGKIKAIKYARENKKPILGICLGMQLMVIEFARN 382

Query: 478 VSGYKKA 498
           V GYK+A
Sbjct: 383 VFGYKEA 389
>sp|P36021|MOT8_HUMAN Monocarboxylate transporter 8 (MCT 8) (X-linked PEST-containing
           transporter) (MCT 7)
          Length = 613

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +1

Query: 355 PGLGRDYIQESMDLIRYVKTQDIPLIVDADGLHLICLDPSIVSGYKKAILTP 510
           PGL + Y+Q    L+  + +  IPL  D  GL ++CL   +  G+   I+ P
Sbjct: 456 PGLKKIYLQVLSFLLLGLMSMMIPLCRDFGGLIVVCLFLGLCDGFFITIMAP 507
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,594,274
Number of Sequences: 369166
Number of extensions: 1589698
Number of successful extensions: 4367
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4357
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5733423530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)