Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_N23
(858 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17276|PH4H_DROME Protein henna [Includes: Phenylalanine... 426 e-119
sp|P90925|PH4H_CAEEL Probable phenylalanine-4-hydroxylase (... 422 e-118
sp|P04176|PH4H_RAT Phenylalanine-4-hydroxylase (PAH) (Phe-4... 413 e-115
sp|P16331|PH4H_MOUSE Phenylalanine-4-hydroxylase (PAH) (Phe... 411 e-114
sp|P00439|PH4H_HUMAN Phenylalanine-4-hydroxylase (PAH) (Phe... 411 e-114
sp|P17752|TPH1_HUMAN Tryptophan 5-hydroxylase 1 (Tryptophan... 400 e-111
sp|P70080|TPH1_CHICK Tryptophan 5-hydroxylase 1 (Tryptophan... 398 e-110
sp|P17290|TPH1_RABIT Tryptophan 5-hydroxylase 1 (Tryptophan... 396 e-110
sp|Q8CGU9|TPH2_RAT Tryptophan 5-hydroxylase 2 (Tryptophan 5... 396 e-110
sp|P17532|TPH1_MOUSE Tryptophan 5-hydroxylase 1 (Tryptophan... 396 e-110
>sp|P17276|PH4H_DROME Protein henna [Includes: Phenylalanine-4-hydroxylase (PAH)
(Phe-4-monooxygenase); Tryptophan 5-monooxygenase (TRH)
(Tryptophan 5-hydroxylase)]
Length = 452
Score = 426 bits (1095), Expect = e-119
Identities = 189/285 (66%), Positives = 240/285 (84%)
Frame = +2
Query: 2 KDLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIA 181
+DLDRFANQILSYG+ELDADHPGFTDP YR+RRKYFADIA NYK G+P+P ++YT+ EI
Sbjct: 125 RDLDRFANQILSYGSELDADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIE 184
Query: 182 TWRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPV 361
TW +F L LY THAC+E+N++FPLL NCG+ DNIPQL+DVS+FL+DCTGFTLRPV
Sbjct: 185 TWGIIFRNLTKLYKTHACREYNHVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPV 244
Query: 362 AGFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQD 541
AG LSSRDFLAGLAFRVFHSTQYIRHP P+YTPEPDVCHEL+GHVP+F +P FAQFSQ+
Sbjct: 245 AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVPLFADPAFAQFSQE 304
Query: 542 IGLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKK 721
IGL SLGA D+ + KL+T ++FTVE+G+C++ ++KA+GAGLLSS GEL+YCLTD+P K
Sbjct: 305 IGLASLGAPDDYIEKLSTIFWFTVEYGVCRQEGELKAYGAGLLSSYGELEYCLTDKPQLK 364
Query: 722 PFDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
F+P +T + K+PI ++QP+Y++++SF AK + +F +I +PF
Sbjct: 365 DFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKFANSIPRPF 409
>sp|P90925|PH4H_CAEEL Probable phenylalanine-4-hydroxylase (PAH) (Phe-4-monooxygenase)
(Biogenic amine synthesis protein 2)
Length = 457
Score = 422 bits (1085), Expect = e-118
Identities = 195/284 (68%), Positives = 235/284 (82%)
Frame = +2
Query: 5 DLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIAT 184
D+D+FAN+ILSYGAELDADHPGF D YRERRK+FADIA N+K G IP I YT+ EIAT
Sbjct: 127 DIDQFANRILSYGAELDADHPGFKDMTYRERRKFFADIAFNFKHGDKIPTITYTDEEIAT 186
Query: 185 WRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPVA 364
WRTV+++L +YP +AC+EFNYIFPLLQQNCG+ D IPQLQDVSDFLKDCTG+T+RPVA
Sbjct: 187 WRTVYNELTVMYPKNACQEFNYIFPLLQQNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVA 246
Query: 365 GFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQDI 544
G LSSRDFLAGLAFRVFHSTQYIRH P YTPEPD+CHELLGHVP+F + EFAQFSQ+I
Sbjct: 247 GLLSSRDFLAGLAFRVFHSTQYIRHHSAPKYTPEPDICHELLGHVPLFADVEFAQFSQEI 306
Query: 545 GLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKKP 724
GL SLGA D+ + KLAT Y+FT+EFG+C+++ + KA+GAGLLSS GELQY L+D+P
Sbjct: 307 GLASLGAPDDVIEKLATLYWFTIEFGICQQDGEKKAYGAGLLSSFGELQYALSDKPEVVD 366
Query: 725 FDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
FDP + + K+PI EYQP YF++ESF AK +L+ + TI +PF
Sbjct: 367 FDPAVCCVTKYPITEYQPKYFLAESFASAKNKLKSWAATINRPF 410
>sp|P04176|PH4H_RAT Phenylalanine-4-hydroxylase (PAH) (Phe-4-monooxygenase)
Length = 453
Score = 413 bits (1062), Expect = e-115
Identities = 196/285 (68%), Positives = 230/285 (80%)
Frame = +2
Query: 2 KDLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIA 181
++LDRFANQILSYGAELDADHPGF DPVYR RRK FADIA NY+ GQPIPR+EYTE E
Sbjct: 126 QELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEEKQ 185
Query: 182 TWRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPV 361
TW TVF L LY THAC E N+IFPLL++ CG+ DNIPQL+DVS FL+ CTGF LRPV
Sbjct: 186 TWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPV 245
Query: 362 AGFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQD 541
AG LSSRDFL GLAFRVFH TQYIRH P+YTPEPD+CHELLGHVP+F + FAQFSQ+
Sbjct: 246 AGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQE 305
Query: 542 IGLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKK 721
IGL SLGA DE + KLAT Y+FTVEFGLCKE + IKA+GAGLLSS GELQYCL+D+P
Sbjct: 306 IGLASLGAPDEYIEKLATIYWFTVEFGLCKEGDSIKAYGAGLLSSFGELQYCLSDKPKLL 365
Query: 722 PFDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
P + T+ Q++ + E+QP+Y+++ESF DAK ++R F TI +PF
Sbjct: 366 PLELEKTACQEYSVTEFQPLYYVAESFSDAKEKVRTFAATIPRPF 410
>sp|P16331|PH4H_MOUSE Phenylalanine-4-hydroxylase (PAH) (Phe-4-monooxygenase)
Length = 453
Score = 411 bits (1057), Expect = e-114
Identities = 195/285 (68%), Positives = 230/285 (80%)
Frame = +2
Query: 2 KDLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIA 181
++LDRFANQILSYGAELDADHPGF DPVYR RRK FADIA NY+ GQPIPR+EYTE E
Sbjct: 126 QELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEERK 185
Query: 182 TWRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPV 361
TW TVF L LY THAC E N+IFPLL++ CG+ DNIPQL+DVS FL+ CTGF LRPV
Sbjct: 186 TWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPV 245
Query: 362 AGFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQD 541
AG LSSRDFL GLAFRVFH TQYIRH P+YTPEPD+CHELLGHVP+F + FAQFSQ+
Sbjct: 246 AGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQE 305
Query: 542 IGLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKK 721
IGL SLGA DE + KLAT Y+FTVEFGLCKE + IKA+GAGLLSS GELQYCL+D+P
Sbjct: 306 IGLASLGAPDEYIEKLATIYWFTVEFGLCKEGDSIKAYGAGLLSSFGELQYCLSDKPKLL 365
Query: 722 PFDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
P + T+ Q++ + E++P+Y+++ESF DAK ++R F TI +PF
Sbjct: 366 PLELEKTACQEYTVTEFRPLYYVAESFNDAKEKVRTFAATIPRPF 410
>sp|P00439|PH4H_HUMAN Phenylalanine-4-hydroxylase (PAH) (Phe-4-monooxygenase)
Length = 452
Score = 411 bits (1056), Expect = e-114
Identities = 193/285 (67%), Positives = 231/285 (81%)
Frame = +2
Query: 2 KDLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIA 181
++LDRFANQILSYGAELDADHPGF DPVYR RRK FADIA NY+ GQPIPR+EY E E
Sbjct: 126 QELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYMEEEKK 185
Query: 182 TWRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPV 361
TW TVF L +LY THAC E+N+IFPLL++ CG+ DNIPQL+DVS FL+ CTGF LRPV
Sbjct: 186 TWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTCTGFRLRPV 245
Query: 362 AGFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQD 541
AG LSSRDFL GLAFRVFH TQYIRH P+YTPEPD+CHELLGHVP+F + FAQFSQ+
Sbjct: 246 AGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDRSFAQFSQE 305
Query: 542 IGLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKK 721
IGL SLGA DE + KLAT Y+FTVEFGLCK+ + IKA+GAGLLSS GELQYCL+++P
Sbjct: 306 IGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYGAGLLSSFGELQYCLSEKPKLL 365
Query: 722 PFDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
P + T++Q + + E+QP+Y+++ESF DAK ++R F TI +PF
Sbjct: 366 PLELEKTAIQNYTVTEFQPLYYVAESFNDAKEKVRNFAATIPRPF 410
>sp|P17752|TPH1_HUMAN Tryptophan 5-hydroxylase 1 (Tryptophan 5-monooxygenase 1)
Length = 444
Score = 400 bits (1027), Expect = e-111
Identities = 188/284 (66%), Positives = 226/284 (79%)
Frame = +2
Query: 5 DLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIAT 184
DLD AN++L YG+ELDADHPGF D VYR+RRKYFAD+A+NYK G PIP++E+TE EI T
Sbjct: 114 DLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKVEFTEEEIKT 173
Query: 185 WRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPVA 364
W TVF +L LYPTHAC+E+ PLL + CGY DNIPQL+DVS+FLK+ TGF++RPVA
Sbjct: 174 WGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVA 233
Query: 365 GFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQDI 544
G+LS RDFL+GLAFRVFH TQY+RH P YTPEPD CHELLGHVP+ P FAQFSQ+I
Sbjct: 234 GYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFSQEI 293
Query: 545 GLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKKP 724
GL SLGAS+E V KLATCYFFTVEFGLCK++ ++ FGAGLLSS EL++ L+ KP
Sbjct: 294 GLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAKVKP 353
Query: 725 FDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
FDP IT Q+ I +Q VYF+SESF DAK ++REF KTI++PF
Sbjct: 354 FDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFTKTIKRPF 397
>sp|P70080|TPH1_CHICK Tryptophan 5-hydroxylase 1 (Tryptophan 5-monooxygenase 1)
Length = 445
Score = 398 bits (1022), Expect = e-110
Identities = 187/284 (65%), Positives = 225/284 (79%)
Frame = +2
Query: 5 DLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIAT 184
DLD+ AN++L YG++LDADHPGF D VYR+RRKYFAD+A+NYK G PIP IE+TE EI T
Sbjct: 115 DLDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPEIEFTEEEIKT 174
Query: 185 WRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPVA 364
W TV+ +L LYPTHAC+E+ PLL + CGY DNIPQL+DVS FLK+ TGFT+RPVA
Sbjct: 175 WGTVYRELNKLYPTHACREYLKNLPLLTKYCGYREDNIPQLEDVSRFLKERTGFTIRPVA 234
Query: 365 GFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQDI 544
G+LS RDFLAGLAFRVFH TQY+RH P+YTPEPD CHELLGHVP+ P FAQFSQ+I
Sbjct: 235 GYLSPRDFLAGLAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEI 294
Query: 545 GLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKKP 724
GL SLGASDE V KLATCYFFTVEFGLCK+ ++ +GAGLLSS EL++ L+ KP
Sbjct: 295 GLASLGASDEAVQKLATCYFFTVEFGLCKQEGQLRVYGAGLLSSISELKHSLSGSAKVKP 354
Query: 725 FDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
FDP +T Q+ I +Q VYF+SESF +AK ++REF KTI++PF
Sbjct: 355 FDPKVTCKQECLITTFQEVYFVSESFEEAKEKMREFAKTIKRPF 398
>sp|P17290|TPH1_RABIT Tryptophan 5-hydroxylase 1 (Tryptophan 5-monooxygenase 1)
Length = 444
Score = 396 bits (1018), Expect = e-110
Identities = 186/284 (65%), Positives = 226/284 (79%)
Frame = +2
Query: 5 DLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIAT 184
DLD AN++L YG+ELDADHPGF D VYR+RRKYFAD+A++YK G PIP++E+TE EI T
Sbjct: 114 DLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMSYKYGDPIPKVEFTEEEIKT 173
Query: 185 WRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPVA 364
W TVF +L LYPTHAC+E+ PLL + CGY DNIPQL+D+S+FLK+ TGF++RPVA
Sbjct: 174 WGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDISNFLKERTGFSIRPVA 233
Query: 365 GFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQDI 544
G+LS RDFL+GLAFRVFH TQY+RH P YTPEPD CHELLGHVP+ P FAQFSQ+I
Sbjct: 234 GYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEPSFAQFSQEI 293
Query: 545 GLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKKP 724
GL SLGAS+E V KLATCYFFTVEFGLCK++ ++ FGAGLLSS EL++ L+ KP
Sbjct: 294 GLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHVLSGHAKVKP 353
Query: 725 FDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
FDP IT Q+ I +Q VYF+SESF DAK ++REF KTI++PF
Sbjct: 354 FDPKITYKQECLITTFQDVYFVSESFEDAKEKMREFTKTIKRPF 397
>sp|Q8CGU9|TPH2_RAT Tryptophan 5-hydroxylase 2 (Tryptophan 5-monooxygenase 2) (Neuronal
tryptophan hydroxylase)
Length = 485
Score = 396 bits (1017), Expect = e-110
Identities = 183/284 (64%), Positives = 227/284 (79%)
Frame = +2
Query: 5 DLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIAT 184
+LDR ++++L YG ELDADHPGF D VYR+RRKYF D+A+ YK GQPIPR+EYTE E T
Sbjct: 155 ELDRCSHRVLMYGTELDADHPGFKDNVYRQRRKYFVDVAMGYKYGQPIPRVEYTEEETKT 214
Query: 185 WRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPVA 364
W VF +L LYPTHAC+E+ FPLL + CGY DN+PQL+DVS FLK+ +GFT+RPVA
Sbjct: 215 WGVVFRELSKLYPTHACREYLKNFPLLTKYCGYREDNVPQLEDVSMFLKERSGFTVRPVA 274
Query: 365 GFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQDI 544
G+LS RDFLAGLA+RVFH TQY+RH P+YTPEPD CHELLGHVP+ +P+FAQFSQ+I
Sbjct: 275 GYLSPRDFLAGLAYRVFHCTQYVRHGSDPLYTPEPDTCHELLGHVPLLADPKFAQFSQEI 334
Query: 545 GLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKKP 724
GL SLGASDEDV KLATCYFFT+EFGLCK+ ++A+GAGLLSS GEL++ L+D+ K
Sbjct: 335 GLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKA 394
Query: 725 FDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
FDP T LQ+ I +Q YF+SESF +AK ++R+F K+I +PF
Sbjct: 395 FDPKTTCLQECLITTFQDAYFVSESFEEAKEKMRDFAKSITRPF 438
>sp|P17532|TPH1_MOUSE Tryptophan 5-hydroxylase 1 (Tryptophan 5-monooxygenase 1)
Length = 447
Score = 396 bits (1017), Expect = e-110
Identities = 185/284 (65%), Positives = 225/284 (79%)
Frame = +2
Query: 5 DLDRFANQILSYGAELDADHPGFTDPVYRERRKYFADIALNYKQGQPIPRIEYTEREIAT 184
DLD AN++L YG+ELDADHPGF D VYR RRKYFA++A+NYK G PIP+IE+TE EI T
Sbjct: 117 DLDFCANRVLLYGSELDADHPGFKDNVYRRRRKYFAELAMNYKHGDPIPKIEFTEEEIKT 176
Query: 185 WRTVFDKLVTLYPTHACKEFNYIFPLLQQNCGYTRDNIPQLQDVSDFLKDCTGFTLRPVA 364
W T+F +L LYPTHAC+E+ PLL + CGY DNIPQL+DVS+FLK+ TGF++RPVA
Sbjct: 177 WGTIFRELNKLYPTHACREYLRNLPLLSKYCGYREDNIPQLEDVSNFLKERTGFSIRPVA 236
Query: 365 GFLSSRDFLAGLAFRVFHSTQYIRHPDVPIYTPEPDVCHELLGHVPMFCNPEFAQFSQDI 544
G+LS RDFL+GLAFRVFH TQY+RH P+YTPEPD CHELLGHVP+ P FAQFSQ+I
Sbjct: 237 GYLSPRDFLSGLAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEI 296
Query: 545 GLVSLGASDEDVLKLATCYFFTVEFGLCKENNDIKAFGAGLLSSSGELQYCLTDEPTKKP 724
GL SLGAS+E V KLATCYFFTVEFGLCK++ ++ FGAGLLSS EL++ L+ KP
Sbjct: 297 GLASLGASEETVQKLATCYFFTVEFGLCKQDGQLRVFGAGLLSSISELKHALSGHAKVKP 356
Query: 725 FDPIITSLQKFPIVEYQPVYFISESFIDAKFRLREFCKTIEKPF 856
FDP I Q+ I +Q VYF+SESF DAK ++REF KT+++PF
Sbjct: 357 FDPKIACKQECLITSFQDVYFVSESFEDAKEKMREFAKTVKRPF 400
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,885,554
Number of Sequences: 369166
Number of extensions: 1999529
Number of successful extensions: 5349
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5337
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)