Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_N12
(893 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06761|GRP78_RAT 78 kDa glucose-regulated protein precur... 442 e-124
sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein prec... 441 e-123
sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein prec... 441 e-123
sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein prec... 439 e-123
sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein prec... 439 e-123
sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein prec... 439 e-123
sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein prec... 436 e-122
sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor 434 e-121
sp|P27420|HSP7C_CAEEL Heat shock 70 kDa protein C precursor 432 e-121
sp|Q24798|GRP78_ECHGR 78 kDa glucose-regulated protein prec... 428 e-119
>sp|P06761|GRP78_RAT 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
(Steroidogenesis-activator polypeptide)
Length = 654
Score = 442 bits (1138), Expect = e-124
Identities = 214/292 (73%), Positives = 251/292 (85%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 344 KVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAG 403
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DNQPTVTI
Sbjct: 404 VLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTI 463
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKGTGNKNK
Sbjct: 464 KVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNK 523
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI DKEKLG
Sbjct: 524 ITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLG 583
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 889
GKLSP DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 584 GKLSPEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein precursor (GRP 78) (BiP) (Protein
1603)
Length = 667
Score = 441 bits (1133), Expect = e-123
Identities = 221/293 (75%), Positives = 250/293 (85%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
+VL+DA++K +DI+EIVLVGGSTRIPKVQQLVKE+FNGKEPSRGINPDE
Sbjct: 353 QVLEDADLKTDDIDEIVLVGGSTRIPKVQQLVKEYFNGKEPSRGINPDEAVAYGAAVQAG 412
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
E+TGD+VLLDV PLT+GIETVGGVMTKLIPRNTVIPTKKSQ+FSTAADNQPTVTI
Sbjct: 413 VLSGEEDTGDLVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTI 472
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
QV+EGER MTKDNH LGKFDLTGIP APRGVPQIEVTFEIDVNGILKV+AEDKGTG+KN+
Sbjct: 473 QVYEGERSMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILKVTAEDKGTGSKNQ 532
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
IVIQ DQNRL+ EDIE+MI DAE YAD+DKKVKE+V+AKN+LE YAYSLK QI DKEKLG
Sbjct: 533 IVIQNDQNRLSPEDIERMINDAEKYADEDKKVKEKVDAKNELESYAYSLKNQIGDKEKLG 592
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQ 892
KLS DKE IT+A +EAI WLE N +A+SE +K ++E IV PIMTKLY+
Sbjct: 593 AKLSDEDKEKITEAVDEAIKWLESNAEAESEAFNEKKTELEGIVQPIMTKLYE 645
>sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 652
Score = 441 bits (1133), Expect = e-123
Identities = 213/292 (72%), Positives = 251/292 (85%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 342 KVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAG 401
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DNQPTVTI
Sbjct: 402 VLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTI 461
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKGTGNKNK
Sbjct: 462 KVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNK 521
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL E+IE+M+ DAE +A++DKK+KER++A+N+LE YAYSLK QI DKEKLG
Sbjct: 522 ITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLG 581
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 889
GKLS DKETI KA EE I WLE +Q AD E+ K++KK++E++V PI++KLY
Sbjct: 582 GKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKSKKKELEEVVQPIVSKLY 633
>sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP) (Endoplasmic reticulum
lumenal Ca(2+) binding protein grp78)
Length = 654
Score = 439 bits (1130), Expect = e-123
Identities = 213/292 (72%), Positives = 250/292 (85%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 344 KVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAG 403
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DNQPTVTI
Sbjct: 404 VLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTI 463
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKGTGNKNK
Sbjct: 464 KVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNK 523
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI DKEKLG
Sbjct: 524 ITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLG 583
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 889
GKLS DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 584 GKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 655
Score = 439 bits (1130), Expect = e-123
Identities = 213/292 (72%), Positives = 250/292 (85%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 345 KVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAG 404
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DNQPTVTI
Sbjct: 405 VLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTI 464
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKGTGNKNK
Sbjct: 465 KVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNK 524
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI DKEKLG
Sbjct: 525 ITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLG 584
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 889
GKLS DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 585 GKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
>sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 654
Score = 439 bits (1130), Expect = e-123
Identities = 213/292 (72%), Positives = 250/292 (85%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 344 KVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAG 403
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DNQPTVTI
Sbjct: 404 VLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTI 463
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKGTGNKNK
Sbjct: 464 KVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNK 523
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI DKEKLG
Sbjct: 524 ITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLG 583
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 889
GKLS DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 584 GKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 658
Score = 436 bits (1121), Expect = e-122
Identities = 213/292 (72%), Positives = 247/292 (84%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL D+++KK DI+EIVLVGGSTRIPK+QQLVKE FNGKEPSRGINPDE
Sbjct: 345 KVLDDSDLKKSDIDEIVLVGGSTRIPKIQQLVKELFNGKEPSRGINPDEAVAYGAAVQAG 404
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DNQPTVTI
Sbjct: 405 VLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTI 464
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKGTGNKNK
Sbjct: 465 KVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNK 524
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI DKEKLG
Sbjct: 525 ITITNDQNRLTPEEIERMVTDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLG 584
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 889
GKLS DKETI KA EE I WLE +Q AD E+ KA+KK++E+IV PI+ KLY
Sbjct: 585 GKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIVGKLY 636
>sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor
Length = 661
Score = 434 bits (1116), Expect = e-121
Identities = 219/293 (74%), Positives = 247/293 (84%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK+D++EIVLVGGSTRIPKVQQL+KEFFNGKEPSRGINPDE
Sbjct: 349 KVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGG 408
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
E+TG+IVLLDV PLT+GIETVGGVMTKLI RNTVIPTKKSQVFSTAADNQPTVTI
Sbjct: 409 VISGEEDTGEIVLLDVNPLTMGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQPTVTI 468
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
QVFEGERPMTKDNH LGKFDLTGIP APRGVPQIEVTFEIDVNGIL V+AEDKGTGNKNK
Sbjct: 469 QVFEGERPMTKDNHQLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNK 528
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL+ EDIE+MI DAE +A+ DKKVKE+ EA+N+LE YAYSLK QI DKEKLG
Sbjct: 529 ITITNDQNRLSPEDIERMINDAEKFAEDDKKVKEKAEARNELESYAYSLKNQIGDKEKLG 588
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQ 892
GKL DK+TI +A +EAISWL N A +EELK QKK++E V PI++KLY+
Sbjct: 589 GKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLYK 641
>sp|P27420|HSP7C_CAEEL Heat shock 70 kDa protein C precursor
Length = 661
Score = 432 bits (1111), Expect = e-121
Identities = 217/293 (74%), Positives = 247/293 (84%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KVL+D+++KK+D++EIVLVGGSTRIPKVQQL+KEFFNGKEPSRGINPDE
Sbjct: 349 KVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGG 408
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
E+TG+IVLLDV PLT+GIETVGGVMTKLI RNTVIPTKKSQVFSTAADNQPTVTI
Sbjct: 409 VISGEEDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTI 468
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
QVFEGERPMTKDNH LGKFDLTG+P APRGVPQIEVTFEIDVNGIL V+AEDKGTGNKNK
Sbjct: 469 QVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNK 528
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
I I DQNRL+ EDIE+MI DAE +A+ DKKVK++ EA+N+LE YAY+LK QI DKEKLG
Sbjct: 529 ITITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLG 588
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQ 892
GKL DK+TI +A EEAISWL N +A +EELK QKK +E V PI++KLY+
Sbjct: 589 GKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641
>sp|Q24798|GRP78_ECHGR 78 kDa glucose-regulated protein precursor (GRP 78)
Length = 651
Score = 428 bits (1100), Expect = e-119
Identities = 209/293 (71%), Positives = 246/293 (83%)
Frame = +2
Query: 14 KVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXXXXXXXX 193
KV++D+ +KKEDI++IVLVGGSTRIPK+QQLVKEFFNGKEP RGINPDE
Sbjct: 343 KVMEDSGLKKEDIDDIVLVGGSTRIPKIQQLVKEFFNGKEPIRGINPDEAVAYGAAVQAG 402
Query: 194 XXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADNQPTVTI 373
E+TGDIVLLDVCPLT+GIETVGGVMTKLIPRNTVIPTKKSQ+FSTAADNQPTVTI
Sbjct: 403 VISGVEDTGDIVLLDVCPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTI 462
Query: 374 QVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKGTGNKNK 553
QVFEGERPMTKDNHFLGKFDLTGIP APRG+PQIEVTFEIDVNGIL+VSAEDKGTG K+
Sbjct: 463 QVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEVTFEIDVNGILRVSAEDKGTGKKSN 522
Query: 554 IVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQINDKEKLG 733
IVI K+ NR+ E+IE+MI+DAE ++DQDK+VKERVE +NDLE AYS+K Q+ DKEK+G
Sbjct: 523 IVINKETNRITPEEIERMIQDAEKFSDQDKQVKERVEVRNDLESLAYSIKNQVKDKEKMG 582
Query: 734 GKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQ 892
GKLS + +TI A +EAI W+E N QA++ + K QK +E +V PI++KLY+
Sbjct: 583 GKLSDDEIKTIEDAADEAIKWMENNPQAETSDYKKQKANLESVVQPIVSKLYE 635
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,340,611
Number of Sequences: 369166
Number of extensions: 1414531
Number of successful extensions: 7214
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6293
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8982382310
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)