Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_L05
(915 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 452 e-127
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 449 e-126
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 448 e-126
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 448 e-126
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 448 e-126
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 442 e-124
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 437 e-122
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 432 e-121
sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2) 378 e-104
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 377 e-104
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 452 bits (1162), Expect = e-127
Identities = 208/289 (71%), Positives = 243/289 (84%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
+R RYL E Y+WDVTE+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 QRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA VLTA P L+EP+Y EI
Sbjct: 690 GVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYACVLTAQPRLMEPIYLVEI 749
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 810 PQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 449 bits (1156), Expect = e-126
Identities = 207/289 (71%), Positives = 242/289 (83%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
+R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 QRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 810 PQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 448 bits (1153), Expect = e-126
Identities = 207/289 (71%), Positives = 241/289 (83%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 810 PQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 448 bits (1153), Expect = e-126
Identities = 207/289 (71%), Positives = 241/289 (83%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 810 PQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 448 bits (1153), Expect = e-126
Identities = 207/289 (71%), Positives = 241/289 (83%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P D S+P V +TRKRKGL E +P LD FLDKL
Sbjct: 810 PQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 442 bits (1136), Expect = e-124
Identities = 205/289 (70%), Positives = 239/289 (82%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
IKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P + L+ DID G+++AR E+K
Sbjct: 570 IKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 629
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA F WATK+
Sbjct: 630 ARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAGFQWATKE 689
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YASVLTA P L+EP+Y EI
Sbjct: 690 GALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYASVLTAQPRLMEPIYLVEI 749
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE +GGIY LN++RG +F E QVAGTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 750 QCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 809
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P D S+ V +TRKRKGL E +P LD FLDKL
Sbjct: 810 PQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGLKEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 437 bits (1125), Expect = e-122
Identities = 206/289 (71%), Positives = 240/289 (83%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
+KKSDPVVSYRE+V S+++CLSKSPNKHNRL+ TA PM + L+ DI+ G + AR E K
Sbjct: 564 LKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFK 623
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R + L E Y++DVTE+RKIWCFGPDG GPNL++DV+KGVQYLNEIKDSVVA F WAT++
Sbjct: 624 ARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGFQWATRE 683
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYASVLTA P LLEPVY EI
Sbjct: 684 GVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYASVLTAEPRLLEPVYLVEI 743
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 744 QCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 803
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+PL+ +KP V DTRKRKGL E VP LD +LDK+
Sbjct: 804 PQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGLKEGVPALDNYLDKM 852
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 432 bits (1111), Expect = e-121
Identities = 201/289 (69%), Positives = 238/289 (82%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
+KKSDPVVSYRE+VS+ S ++CLSKSPNKHNRL M A PM + L DID G ++A+ E K
Sbjct: 556 LKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFK 615
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R RYL E YD+DVTE+RKIWCFGPDG GPN ++D +K VQYLNEIKDSVVA F WA+K+
Sbjct: 616 ARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAGFQWASKE 675
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+ +TA P L+EPVY CEI
Sbjct: 676 GILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAAAITAKPRLMEPVYLCEI 735
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE A+GGIY LN+RRG +F E QV GTP +VVKAYLPVNESF FT++LR+ TGGQAF
Sbjct: 736 QCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKAYLPVNESFGFTADLRSNTGGQAF 795
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQCVFDHWQ+ PG+P +P SKP V+DTRKRKGL E +P L ++LDKL
Sbjct: 796 PQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLKEGLPDLSQYLDKL 844
>sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2)
Length = 842
Score = 378 bits (970), Expect = e-104
Identities = 184/289 (63%), Positives = 219/289 (75%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
+K S P+VSYRE+V+ SS V LSKSPNKHNR+Y+ A P+ EE+S DI+ G I R + K
Sbjct: 554 LKISPPIVSYRETVNAESSMVALSKSPNKHNRIYVKAQPIDEEVSLDIEKGVINPRDDFK 613
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R R L + + WDVT++RKIWCFGPDGNGPNLVVD +K VQYLNEIKDSVVAAF WATK+
Sbjct: 614 ARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQWATKE 673
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G + EN+R VR NI DVTLHADAIHRGGGQIIPT RR YAS+L A P + EPV+ EI
Sbjct: 674 GPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYASMLLAEPAIQEPVFLVEI 733
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q PE A+GGIYS LNK+RG + SE Q GTP + VKAYLPVNESF F+ ELR TGGQAF
Sbjct: 734 QCPENAIGGIYSVLNKKRGQVISEEQRPGTPLFTVKAYLPVNESFGFSGELRQSTGGQAF 793
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQ +FDHW G+P DP SK G VK+ R+R+G+ DVP +++ DKL
Sbjct: 794 PQLIFDHWANLNGDPTDPTSKVGTIVKEKRERQGMKPDVPGYEEYYDKL 842
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 377 bits (967), Expect = e-104
Identities = 187/289 (64%), Positives = 217/289 (75%)
Frame = +3
Query: 18 IKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMSEELSSDIDAGKITARSEIK 197
+K S PVVSYRESVS+ SS LSKSPNKHNR++MTA PMSEELS I+ G + R + K
Sbjct: 554 LKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFK 613
Query: 198 ERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFNWATKD 377
R R + + + WDVT++RKIWCFGPD G N+VVD +K V YLNEIKDSVVAAF WA+K+
Sbjct: 614 VRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKE 673
Query: 378 GVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYASVLTASPCLLEPVYQCEI 557
G + EEN+R RFNI DV LHADAIHRGGGQIIPTARR YAS L ASP + EPV+ EI
Sbjct: 674 GPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVYASTLLASPIIQEPVFLVEI 733
Query: 558 QGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKAYLPVNESFNFTSELRAQTGGQAF 737
Q E A+GGIYS LNK+RG +FSE Q GTP Y +KAYLPVNESF FT ELR T GQAF
Sbjct: 734 QVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIKAYLPVNESFGFTGELRQATAGQAF 793
Query: 738 PQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSEDVPLLDKFLDKL 884
PQ VFDHW G+PLDP SKPG V + RKRKGL E+VP ++ D+L
Sbjct: 794 PQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLKENVPDYTEYYDRL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,405,217
Number of Sequences: 369166
Number of extensions: 2327181
Number of successful extensions: 6177
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5993
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9318621220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)