Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_J20
(882 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase precur... 245 1e-64
sp|Q5RBU7|PCP_PONPY Lysosomal Pro-X carboxypeptidase precur... 240 4e-63
sp|P42785|PCP_HUMAN Lysosomal Pro-X carboxypeptidase precur... 238 2e-62
sp|Q9EPB1|DPP2_RAT Dipeptidyl-peptidase II precursor (DPP I... 187 3e-47
sp|Q9UHL4|DPP2_HUMAN Dipeptidyl-peptidase II precursor (DPP... 186 6e-47
sp|Q9ET22|DPP2_MOUSE Dipeptidyl-peptidase II precursor (DPP... 184 2e-46
sp|P34676|YO26_CAEEL Putative serine protease Z688.6 precursor 166 8e-41
sp|P34610|PCP1_CAEEL Putative serine protease pcp-1 precursor 131 3e-30
sp|P34528|YM67_CAEEL Putative serine protease K12H4.7 precu... 72 3e-12
sp|P90893|YM9I_CAEEL Putative serine protease F56F10.1 prec... 66 1e-10
>sp|Q7TMR0|PCP_MOUSE Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase)
(PRCP) (Proline carboxypeptidase)
Length = 491
Score = 245 bits (625), Expect = 1e-64
Identities = 123/283 (43%), Positives = 172/283 (60%), Gaps = 4/283 (1%)
Frame = +1
Query: 1 DLLRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENC 180
+L+R+L+ +PGA PVIA GGSYGGMLAAWFR KYP+IV G+LAASAP+ + + C
Sbjct: 154 ELIRHLEKTIPGAQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPIWQLDGMVPC 213
Query: 181 SYPFQVLTKAYQTKGSDACVSNVRNVWPVIQQMNDS-LHLVNLSRIFHTCQPL--KNVDD 351
+++T ++ G C ++R W VI +++ S L +L+ I H C PL + +
Sbjct: 214 GEFMKIVTNDFRKSGP-YCSESIRKSWNVIDKLSGSGSGLQSLTNILHLCSPLTSEKIPT 272
Query: 352 LIAVLTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPIELLNAFFTGLQVF 531
L + + ++ M NYPY NFL P+PAWP+KE C+ L N LL F L V+
Sbjct: 273 LKGWIAETWVNLAMVNYPYACNFLQPLPAWPIKEVCQYLKNPNVSDTVLLQNIFQALSVY 332
Query: 532 YNYTGQIQCLSTT-TNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSC 708
YNY+GQ CL+ + T L GW+ Q CTE+ MP CT+G+ DMF ++ + C
Sbjct: 333 YNYSGQAACLNISQTTTSSLGSMGWSFQACTEMVMPFCTNGIDDMFEPFLWDLEKYSNDC 392
Query: 709 QKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGV 837
+GV PR W T++ GKN+++ SNIIFSNG LDPW+ GGV
Sbjct: 393 FNQWGVKPRPHWMTTMYGGKNISSHSNIIFSNGELDPWSGGGV 435
>sp|Q5RBU7|PCP_PONPY Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase)
(PRCP) (Proline carboxypeptidase)
Length = 496
Score = 240 bits (612), Expect = 4e-63
Identities = 121/296 (40%), Positives = 180/296 (60%), Gaps = 4/296 (1%)
Frame = +1
Query: 1 DLLRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENC 180
+L+++LK +PGA + PVIA GGSYGGMLAAWFR KYP++V G+LAASAP+ ++ C
Sbjct: 156 ELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPC 215
Query: 181 SYPFQVLTKAYQTKGSDACVSNVRNVWPVIQQM-NDSLHLVNLSRIFHTCQPL--KNVDD 351
+++T ++ G C ++R W I ++ N L L+ H C PL +++
Sbjct: 216 GVFMKIVTTDFRKSGPH-CSESIRRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQH 274
Query: 352 LIAVLTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPIELLNAFFTGLQVF 531
L +++ ++ M +YPY +NFL P+PAWP+K C+ L N LL F L V+
Sbjct: 275 LKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVY 334
Query: 532 YNYTGQIQCLSTT-TNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSC 708
YNY+GQ++CL+ + T L GW+ Q CTE+ MP CT+GV DMF S+N + C
Sbjct: 335 YNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDC 394
Query: 709 QKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTM 876
+ +GV PR W T++ GKN+++ +NI+FSNG LDPW+ GGV ++ VT+
Sbjct: 395 FQQWGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTI 450
>sp|P42785|PCP_HUMAN Lysosomal Pro-X carboxypeptidase precursor (Prolylcarboxypeptidase)
(PRCP) (Proline carboxypeptidase) (Angiotensinase C)
(Lysosomal carboxypeptidase C)
Length = 496
Score = 238 bits (607), Expect = 2e-62
Identities = 120/296 (40%), Positives = 179/296 (60%), Gaps = 4/296 (1%)
Frame = +1
Query: 1 DLLRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENC 180
+L+++LK +PGA + PVIA GGSYGGMLAAWFR KYP++V G+LAASAP+ ++ C
Sbjct: 156 ELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPC 215
Query: 181 SYPFQVLTKAYQTKGSDACVSNVRNVWPVIQQM-NDSLHLVNLSRIFHTCQPL--KNVDD 351
+++T ++ G C ++ W I ++ N L L+ H C PL +++
Sbjct: 216 GVFMKIVTTDFRKSGPH-CSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQH 274
Query: 352 LIAVLTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPIELLNAFFTGLQVF 531
L +++ ++ M +YPY +NFL P+PAWP+K C+ L N LL F L V+
Sbjct: 275 LKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVY 334
Query: 532 YNYTGQIQCLSTT-TNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRSC 708
YNY+GQ++CL+ + T L GW+ Q CTE+ MP CT+GV DMF S+N + C
Sbjct: 335 YNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDC 394
Query: 709 QKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTM 876
+ +GV PR W T++ GKN+++ +NI+FSNG LDPW+ GGV ++ VT+
Sbjct: 395 FQQWGVRPRPSWITTMYGGKNISSHTNIVFSNGELDPWSGGGVTKDITDTLVAVTI 450
>sp|Q9EPB1|DPP2_RAT Dipeptidyl-peptidase II precursor (DPP II) (Dipeptidyl aminopeptidase
II) (Quiescent cell proline dipeptidase) (Dipeptidyl
peptidase 7)
Length = 500
Score = 187 bits (475), Expect = 3e-47
Identities = 117/301 (38%), Positives = 168/301 (55%), Gaps = 9/301 (2%)
Frame = +1
Query: 4 LLRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCS 183
LL+ L++NL G +P IAFGGSYGGML+A+ R KYP++VAG+LAASAPV+ V + N
Sbjct: 151 LLQALRHNL-GVQDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPD 209
Query: 184 YPFQVLTKAYQTKGSDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQPL---KNVDDL 354
F+ +T + + S C VR+ + I+ + +S+ F TCQ L K++ L
Sbjct: 210 QFFRDVTADFYGQ-SPKCAQAVRDAFQQIKDLFLQGAYDTISQNFGTCQSLSSPKDLTQL 268
Query: 355 IAVLTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPL---SNLIKDPIELLNAFF--TG 519
+ + M +YPYP NFLGP+PA PVK C+ L I L + +G
Sbjct: 269 FGFARNAFTVLAMMDYPYPTNFLGPLPANPVKVGCERLLSEGQRIMGLRALAGLVYNSSG 328
Query: 520 LQVFYNYTGQIQ-CLSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNN 696
++ ++ Q C T G + W+ Q CTE+ + ++ V DMF F+ +
Sbjct: 329 MEPCFDIYQMYQSCADPTGCGTGSNARAWDYQACTEINLTFDSNNVTDMFPEIPFSDELR 388
Query: 697 DRSCQKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTM 876
+ C ++GV PR W QT FWG +L AASNIIFSNG LDPWA GG+ + + SI VT+
Sbjct: 389 QQYCLDTWGVWPRPDWLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQRNLSTSIIAVTI 448
Query: 877 K 879
+
Sbjct: 449 Q 449
>sp|Q9UHL4|DPP2_HUMAN Dipeptidyl-peptidase II precursor (DPP II) (Dipeptidyl aminopeptidase
II) (Quiescent cell proline dipeptidase) (Dipeptidyl
peptidase 7)
Length = 492
Score = 186 bits (473), Expect = 6e-47
Identities = 119/310 (38%), Positives = 166/310 (53%), Gaps = 17/310 (5%)
Frame = +1
Query: 1 DLLRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENC 180
+LLR L+ +L GA +P IAFGGSYGGML+A+ R KYP++VAG+LAASAPVL V + +
Sbjct: 140 ELLRALRRDL-GAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDS 198
Query: 181 SYPFQVLTKAYQTKGSDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQPLKNVDDLIA 360
+ F+ +T ++ + S C VR + I+ + + F TCQPL + DL
Sbjct: 199 NQFFRDVTADFEGQ-SPKCTQGVREAFRQIKDLFLQGAYDTVRWEFGTCQPLSDEKDLTQ 257
Query: 361 VLT---DGLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPIELLNAFFTGLQVF 531
+ + + M +YPYP +FLGP+PA PVK C L + + TGL+
Sbjct: 258 LFMFARNAFTVLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQR--------ITGLRAL 309
Query: 532 ----YNYTGQIQCLST----------TTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFY 669
YN +G C T G D W+ Q CTE+ + ++ V DMF
Sbjct: 310 AGLVYNASGSEHCYDIYRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFP 369
Query: 670 ASSFNKQNNDRSCQKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSP 849
F + R C ++GV PR W T FWG +L AASNIIFSNG LDPWA GG+ +
Sbjct: 370 DLPFTDELRQRYCLDTWGVWPRPDWLLTSFWGGDLRAASNIIFSNGNLDPWAGGGIRRNL 429
Query: 850 NPSIEIVTMK 879
+ S+ VT++
Sbjct: 430 SASVIAVTIQ 439
>sp|Q9ET22|DPP2_MOUSE Dipeptidyl-peptidase II precursor (DPP II) (Dipeptidyl aminopeptidase
II) (Quiescent cell proline dipeptidase) (Dipeptidyl
peptidase 7)
Length = 506
Score = 184 bits (468), Expect = 2e-46
Identities = 116/301 (38%), Positives = 170/301 (56%), Gaps = 9/301 (2%)
Frame = +1
Query: 4 LLRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCS 183
LL+ L+ +L G +P IAFGGSYGGML+A+ R KYP++VAG+LAASAPV+ V + +
Sbjct: 151 LLQALRQDL-GVHDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAVAGLGDSY 209
Query: 184 YPFQVLTKAYQTKGSDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQPL---KNVDDL 354
F+ +T + + S C VR+ + I+ + +S+ F TCQ L K++ L
Sbjct: 210 QFFRDVTADFYGQ-SPKCAQAVRDAFQQIKDLFLQGAYDTISQNFGTCQSLSSPKDLTQL 268
Query: 355 IAVLTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPIEL-----LNAFFTG 519
+ + M +YPYP +FLGP+PA PVK C+ L N + + L L +G
Sbjct: 269 FGFARNAFTVLAMMDYPYPTDFLGPLPANPVKVGCQRLLNEGQRIMGLRALAGLVYNSSG 328
Query: 520 LQVFYN-YTGQIQCLSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNN 696
+ Y+ Y C T G D W+ Q CTE+ + ++ V DMF F+++
Sbjct: 329 TEPCYDIYRLYQSCADPTGCGTGSDARAWDYQACTEINLTFDSNNVTDMFPEIPFSEELR 388
Query: 697 DRSCQKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNPSIEIVTM 876
+ C ++GV PR W QT FWG +L AASNIIFSNG LDPWA GG+ ++ + S+ VT+
Sbjct: 389 QQYCLDTWGVWPRQDWLQTSFWGGDLKAASNIIFSNGDLDPWAGGGIQSNLSTSVIAVTI 448
Query: 877 K 879
+
Sbjct: 449 Q 449
>sp|P34676|YO26_CAEEL Putative serine protease Z688.6 precursor
Length = 507
Score = 166 bits (420), Expect = 8e-41
Identities = 110/307 (35%), Positives = 154/307 (50%), Gaps = 24/307 (7%)
Frame = +1
Query: 28 LPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMV--GNIENCSYPFQVL 201
+ GA S VIAFGGSYGGML+AWFR KYP+IV G++AASAPV NI Y F ++
Sbjct: 158 IKGAQKSAVIAFGGSYGGMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDF-IV 216
Query: 202 TKAYQTKGSDACVSNVRNVWPVIQQMNDSLHLVNLSRIFHTCQP---LKNVDD---LIAV 363
T+A+ G + + W + ++ S + + P L+N DD L
Sbjct: 217 TRAFLDAGCNR--KAIEKGWIALDELAKSDSGRQYLNVLYKLDPKSKLENKDDIGFLKQY 274
Query: 364 LTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPIELLNAFFTGLQVFYNYT 543
+ + + M M NYPYP +FL +PAWPVKE CK S K E + + ++YNYT
Sbjct: 275 IRESMEAMAMVNYPYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQLYKIVNLYYNYT 334
Query: 544 GQ--------IQCLSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASS--FNKQN 693
G +C S +L D GW QTCTE+ MP+C G + F+ F +
Sbjct: 335 GDKSTHCANAAKCDSAYGSLG--DPLGWPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEK 392
Query: 694 NDRSCQKSFG------VTPRWGWGQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNSPNP 855
C ++F R G F +L +ASNI+FSNG LDPW+ GG +S
Sbjct: 393 YAEFCMQTFSSIHYNKTLLRPLAGGLAFGATSLPSASNIVFSNGYLDPWSGGGYDHSDKV 452
Query: 856 SIEIVTM 876
++++
Sbjct: 453 QGSVISV 459
>sp|P34610|PCP1_CAEEL Putative serine protease pcp-1 precursor
Length = 565
Score = 131 bits (329), Expect = 3e-30
Identities = 97/301 (32%), Positives = 147/301 (48%), Gaps = 29/301 (9%)
Frame = +1
Query: 19 KYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMV--GNIENCSYPF 192
K P A+ VI+FGGSYGGML+AWFRQKYP+IV G+ A SAP++ + G ++ ++
Sbjct: 162 KMTFPAATQ--VISFGGSYGGMLSAWFRQKYPHIVKGAWAGSAPLIYMNGGGVDPGAFD- 218
Query: 193 QVLTKAYQTKGSDACV-SNVRNVWPVIQQMNDSLHLVNLSRIF--HTCQPLKNVDD---L 354
+ ++ Y G + + +N N + + +N + +F ++N D L
Sbjct: 219 HITSRTYIDNGCNRFILANAWNATLNLSSTDAGRQWLNNNTVFKLDPRTKIRNQTDGWNL 278
Query: 355 IAVLTDGLFDMGMANYPYPANFLGPMPAWPVKEFCKPL--SNLIKDPIELLNAFFTGLQV 528
A L + + M M +YPYP FL P+PAWPV C + + +L+ A +
Sbjct: 279 NAYLREAIEYMAMVDYPYPTGFLEPLPAWPVTVACGYMNANGTSFSDKDLVKAVANAANI 338
Query: 529 FYNYTGQIQ---------CLSTTTNLPGLDDNGWNVQTCTELPMPMCTDGVKDMFYASSF 681
+YNY C T G D+ GW Q C+E+ M MC G + + +
Sbjct: 339 YYNYNRDPNFTYCIDFSICGDQGTGGLGGDELGWPWQECSEIIMAMCASGGSNDVFWNEC 398
Query: 682 NK------QNNDRSCQKSFGVTPRWGWG----QTLFWGKNLNAASNIIFSNGLLDPWAAG 831
K Q S KS G TP+ W +TL+ G +L+ +SN+I + G LDPW+ G
Sbjct: 399 GKDIYQTLQQGCVSIFKSMGWTPK-NWNIDAVKTLY-GYDLSGSSNLILTQGHLDPWSGG 456
Query: 832 G 834
G
Sbjct: 457 G 457
>sp|P34528|YM67_CAEEL Putative serine protease K12H4.7 precursor
Length = 510
Score = 71.6 bits (174), Expect = 3e-12
Identities = 74/315 (23%), Positives = 123/315 (39%), Gaps = 30/315 (9%)
Frame = +1
Query: 7 LRYLKYNLPGASHSPVIAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSY 186
++ + P +++ + FGGSY G LAAW R K+P +V ++ +S PV
Sbjct: 166 IKAMTAKFPQLANAKWVTFGGSYSGALAAWTRAKHPELVYAAVGSSGPV-------QAEV 218
Query: 187 PFQVLTKAYQ---TKGSDACVSNVRNVWPVIQQ-MNDSLHLVNLSRIFHTCQPLKNVDDL 354
F+ + Q T+ S C ++V + ++ + S L FH CQ ++ D
Sbjct: 219 DFKEYLEVVQNSITRNSTECAASVTQGFNLVASLLQTSDGRKQLKTAFHLCQDIQMDDKS 278
Query: 355 IAVLTDGLFDMGMANYPYPANFLGPMPAWPV--KEFCKPLSNLIKDPIELL---NAFFTG 519
+ + ++ M Y + G C+ N P++ L N +F
Sbjct: 279 LKYFWETVYSPYMEVVQYSGDAAGSFATQLTISHAICRYHINTKSTPLQKLKQVNDYFNQ 338
Query: 520 LQVFY-----NYTGQIQCLSTTTNLPGLDDNGWNVQTCTELPMPMCTD---------GVK 657
+ ++ +Y G I + T D W QTCTE T GV
Sbjct: 339 VSGYFGCNDIDYNGFISFMKDETFGEAQSDRAWVWQTCTEFGYYQSTSSATAGPWFGGVS 398
Query: 658 DM---FY----ASSFNKQNNDRSCQKSFGVTPRWGWGQTLFWGKNLNAASNIIFSNGLLD 816
++ +Y + + N + Q S T ++ G+ NLN I+ NG +D
Sbjct: 399 NLPAQYYIDECTAIYGAAYNSQEVQTSVDYTNQYYGGR-----DNLN-TDRILLPNGDID 452
Query: 817 PWAAGGVFNSPNPSI 861
PW A G S N +I
Sbjct: 453 PWHALGKLTSSNSNI 467
>sp|P90893|YM9I_CAEEL Putative serine protease F56F10.1 precursor
Length = 540
Score = 65.9 bits (159), Expect = 1e-10
Identities = 70/294 (23%), Positives = 115/294 (39%), Gaps = 30/294 (10%)
Frame = +1
Query: 55 IAFGGSYGGMLAAWFRQKYPNIVAGSLAASAPVLMVGNIENCSYPFQVLTKAYQTKGSDA 234
+ FGGSY G LAAWFRQKYP + GS+A+SAPV N++ Y + ++ +
Sbjct: 177 VTFGGSYPGSLAAWFRQKYPQLTVGSVASSAPV----NLKLDFYEYAMVVEDDLRITDPK 232
Query: 235 CVSNVRNVWPVIQQM-------NDSLHLVNLSRIFHTCQPLKNVDDLIAVLTDGLFDMGM 393
C ++ + +Q++ N + NL F ++++ + + GM
Sbjct: 233 CAQATKDAFVQMQKLALTAEGRNSLNNHFNLQPPFDANTTKLDINNFFGNIFNTY--QGM 290
Query: 394 ANYPYPANFLGPMPAWPVKEFCKPLSNLIKDPI--ELLNAFF---------TGLQVFYNY 540
Y Y V++ C ++N + + + N F L V N
Sbjct: 291 TQYTYDGQSNSTHSDKTVRKMCDIMTNATETDVVMRVENLFLWFNQMEPASANLTVMPNS 350
Query: 541 TGQI--QCLSTTTNLPGLDD---NGWNVQTCTELPMPMCTDGVKDMFYASSFNKQNNDRS 705
+ Q S N+ G D GW C E+ T+ ++F D
Sbjct: 351 YWDVISQVGSGDLNVLGPDGAAARGWMWLCCNEIGFLQTTNQGNNVFGTGVPLNLFID-M 409
Query: 706 CQKSFGVTPRWGW-------GQTLFWGKNLNAASNIIFSNGLLDPWAAGGVFNS 846
C FG + + Q + G + A+N++ NG LDPW A G + +
Sbjct: 410 CTDMFGDSMKMSQIMGGNKKSQNYYGGADFYNATNVVLPNGSLDPWHALGTYGT 463
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,366,792
Number of Sequences: 369166
Number of extensions: 2206958
Number of successful extensions: 6328
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6306
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)