Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_H09
(594 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 184 1e-46
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 184 1e-46
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 184 1e-46
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 181 2e-45
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 178 1e-44
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 178 1e-44
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 177 2e-44
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 177 2e-44
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 177 2e-44
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 177 2e-44
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 184 bits (467), Expect = 1e-46
Identities = 94/169 (55%), Positives = 113/169 (66%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
+KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ K
Sbjct: 538 SKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597
Query: 365 ELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 ELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 184 bits (467), Expect = 1e-46
Identities = 94/169 (55%), Positives = 113/169 (66%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
+KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ K
Sbjct: 538 SKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 597
Query: 365 ELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 ELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 184 bits (467), Expect = 1e-46
Identities = 94/169 (55%), Positives = 113/169 (66%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
+KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ K
Sbjct: 538 SKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQK 597
Query: 365 ELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 ELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 181 bits (458), Expect = 2e-45
Identities = 94/172 (54%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
AKN LESYA+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF++ K
Sbjct: 538 AKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQK 597
Query: 365 ELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 ELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 178 bits (451), Expect = 1e-44
Identities = 92/174 (52%), Positives = 113/174 (64%), Gaps = 5/174 (2%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGI+NVSA +K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
+KNSLESYA+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++H K
Sbjct: 538 SKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQK 597
Query: 365 ELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 ELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 178 bits (451), Expect = 1e-44
Identities = 93/172 (54%), Positives = 111/172 (64%), Gaps = 3/172 (1%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
AKN LESYA+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE+++ K
Sbjct: 538 AKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQK 597
Query: 365 ELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
+LEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 DLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 177 bits (449), Expect = 2e-44
Identities = 95/169 (56%), Positives = 109/169 (64%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNVSA +K TGK+NKITITNDKGRLSKD+IERMV RIA
Sbjct: 477 FDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIA 536
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
AKN+LESYA+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDEF++ K
Sbjct: 537 AKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQK 596
Query: 365 ELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 597 ELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 177 bits (448), Expect = 2e-44
Identities = 92/169 (54%), Positives = 110/169 (65%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNV+A +K TGKENKITITNDKGRLSKDDI+RMV R+A
Sbjct: 481 FDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVA 540
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
AKN+LESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++ K
Sbjct: 541 AKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQK 600
Query: 365 ELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 601 ELERVCNPIISKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 177 bits (448), Expect = 2e-44
Identities = 92/170 (54%), Positives = 109/170 (64%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNVSA++K TGKENKITITNDKGRLSK+DIERMV ++
Sbjct: 485 FDVDANGILNVSALDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQ 544
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
AKNSLESY Y MK TVEDEK+K KISE D+K I+ KC E + W+DKNQ A KD++++ K
Sbjct: 545 AKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQK 604
Query: 365 ELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 605 ELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 177 bits (448), Expect = 2e-44
Identities = 93/173 (53%), Positives = 113/173 (65%), Gaps = 4/173 (2%)
Frame = +2
Query: 5 FGTRANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIA 184
F ANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV +++
Sbjct: 478 FDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVS 537
Query: 185 AKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYK 364
+KNSL+SYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++ K
Sbjct: 538 SKNSLKSYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQK 597
Query: 365 ELEKVCNPIMTKMYQ----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 511
ELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 598 ELEKVCNPIITKLYQSAGGMPGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 650
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,494,699
Number of Sequences: 369166
Number of extensions: 519786
Number of successful extensions: 2247
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2063
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4504118060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)