Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_H08
(858 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform ... 314 2e-85
sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform ... 313 5e-85
sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (P... 313 5e-85
sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform ... 311 1e-84
sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform ... 310 3e-84
sp|P35815|PP2CB_RAT Protein phosphatase 2C beta isoform (PP... 298 1e-80
sp|O75688|PP2CB_HUMAN Protein phosphatase 2C beta isoform (... 298 2e-80
sp|O62830|PP2CB_BOVIN Protein phosphatase 2C beta isoform (... 297 2e-80
sp|P36993|PP2CB_MOUSE Protein phosphatase 2C beta isoform (... 294 2e-79
sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F1... 182 8e-46
>sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 314 bits (804), Expect = 2e-85
Identities = 152/271 (56%), Positives = 197/271 (72%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPK EK + +G L YGLS+MQGWR++MEDAHT+++ L +SW++F VYD
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V++ C + LL I N +FK G P +E VK GIR GFL++D+ +
Sbjct: 61 GHAGSQVAKYCCEHLLDHITNNQDFK----GSAGAP-SVENVKNGIRTGFLEIDEHMRVM 115
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
E ++G D+SGST + V I+P++ F NCGDSRG+L RN VHFFT+DHKP NP E++RI
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI 175
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQLVSP+PE+ IE+ +DQ I+
Sbjct: 176 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADLSK 857
LACDG+WDVM N+EL +F+ R + DL K
Sbjct: 236 LACDGIWDVMGNEELCDFVRSRLEVTDDLEK 266
>sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 313 bits (801), Expect = 5e-85
Identities = 151/271 (55%), Positives = 197/271 (72%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPK EK + +G L YGLS+MQGWR++MEDAHT+++ L ++W++F VYD
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V++ C + LL I N +FK G P +E VK GIR GFL++D+ +
Sbjct: 61 GHAGSQVAKYCCEHLLDHITNNQDFK----GSAGAP-SVENVKNGIRTGFLEIDEHMRVM 115
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
E ++G D+SGST + V I+P++ F NCGDSRG+L RN VHFFT+DHKP NP E++RI
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI 175
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQLVSP+PE+ IE+ +DQ I+
Sbjct: 176 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADLSK 857
LACDG+WDVM N+EL +F+ R + DL K
Sbjct: 236 LACDGIWDVMGNEELCDFVRSRLEVTDDLEK 266
>sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 313 bits (801), Expect = 5e-85
Identities = 151/271 (55%), Positives = 197/271 (72%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPK EK + +G L YGLS+MQGWR++MEDAHT+++ L ++W++F VYD
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V++ C + LL I N +FK G P +E VK GIR GFL++D+ +
Sbjct: 61 GHAGSQVAKYCCEHLLDHITNNQDFK----GSAGAP-SVENVKNGIRTGFLEIDEHMRVM 115
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
E ++G D+SGST + V I+P++ F NCGDSRG+L RN VHFFT+DHKP NP E++RI
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI 175
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQLVSP+PE+ IE+ +DQ I+
Sbjct: 176 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADLSK 857
LACDG+WDVM N+EL +F+ R + DL K
Sbjct: 236 LACDGIWDVMGNEELCDFVRSRLEVTDDLEK 266
>sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 311 bits (798), Expect = 1e-84
Identities = 150/271 (55%), Positives = 197/271 (72%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPK EK + +G L YGLS+MQGWR++MEDAHT+++ L ++W++F VYD
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V++ C + LL I N +F+ G P +E VK GIR GFL++D+ +
Sbjct: 61 GHAGSQVAKYCCEHLLDHITNNQDFR----GSAGAP-SVENVKNGIRTGFLEIDEHMRVM 115
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
E ++G D+SGST + V I+P++ F NCGDSRG+L RN VHFFT+DHKP NP E++RI
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERI 175
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQLVSP+PE+ IE+ +DQ I+
Sbjct: 176 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADLSK 857
LACDG+WDVM N+EL +F+ R + DL K
Sbjct: 236 LACDGIWDVMGNEELCDFVRSRLEVTDDLEK 266
>sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform (PP2C-alpha)
Length = 382
Score = 310 bits (795), Expect = 3e-84
Identities = 150/271 (55%), Positives = 197/271 (72%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPK EK + +G L YGLS+MQGWR++MEDAHT+++ L ++W++F VYD
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V++ C + LL I N +FK G P +E VK GIR GFL++D+ +
Sbjct: 61 GHAGSQVAKYCCEHLLDHITNNQDFK----GSAGAP-SVENVKNGIRTGFLEIDEHMRVM 115
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
E ++G D+SGST + V I+P++ F NCGDSRG+L RN V+FFT+DHKP NP E++RI
Sbjct: 116 SEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERI 175
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQLVSP+PE+ IE+ +DQ I+
Sbjct: 176 QNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFII 235
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADLSK 857
LACDG+WDVM N+EL +F+ R + DL K
Sbjct: 236 LACDGIWDVMGNEELCDFVRSRLEVTDDLEK 266
>sp|P35815|PP2CB_RAT Protein phosphatase 2C beta isoform (PP2C-beta) (IA) (Protein
phosphatase 1B)
Length = 390
Score = 298 bits (764), Expect = 1e-80
Identities = 145/269 (53%), Positives = 190/269 (70%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPKTEK + G L YGLS+MQGWR++MEDAHT+++ + + W++F VYD
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V+ CS LL I +F+ + F +E VK GIR GFL +D+ +
Sbjct: 61 GHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNF 120
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
++ NG D+SGST + V I+P ++ F NCGDSR VL RN V F T+DHKP NP E++RI
Sbjct: 121 SDLRNGMDRSGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERI 180
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGD+DYK V+ KGPTEQLVSP+PE+ I + ED+ +V
Sbjct: 181 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRA-EEDEFVV 239
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADL 851
LACDG+WDVM+N+EL EF+ R + DL
Sbjct: 240 LACDGIWDVMSNEELCEFVNSRLEVSDDL 268
>sp|O75688|PP2CB_HUMAN Protein phosphatase 2C beta isoform (PP2C-beta)
Length = 479
Score = 298 bits (762), Expect = 2e-80
Identities = 144/269 (53%), Positives = 190/269 (70%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPKTEK + G L YGLS+MQGWR++MEDAHT+++ + + W++F VYD
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V+ CS LL I +F+ + +E VK GIR GFL +D+ +
Sbjct: 61 GHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNF 120
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
++ NG D+SGST + V I+PK++ F NCGDSR VL RN V F T+DHKP NP E++RI
Sbjct: 121 SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNpreKERI 180
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGD+DYK V+ KGPTEQLVSP+PE+ I + ED+ I+
Sbjct: 181 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRA-EEDEFII 239
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADL 851
LACDG+WDVM+N+EL E++ R + DL
Sbjct: 240 LACDGIWDVMSNEELCEYVKSRLEVSDDL 268
>sp|O62830|PP2CB_BOVIN Protein phosphatase 2C beta isoform (PP2C-beta)
Length = 387
Score = 297 bits (761), Expect = 2e-80
Identities = 145/269 (53%), Positives = 190/269 (70%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPKTEK + G L YGLS+MQGWR++MEDAHT+++ + + W++F VYD
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V+ CS LL I N +F+ +E VK GIR GFL +D+ +
Sbjct: 61 GHAGSRVANYCSTHLLEHITNNEDFRAAGKSGSALEPSVENVKNGIRTGFLKIDEYMRNF 120
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
++ NG D+SGST + V I+PK++ F NCGDSR VL R+ V F T+DHKP NP E++RI
Sbjct: 121 SDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRSGQVCFSTQDHKPCNpreKERI 180
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGD+DYK V+ KGPTEQLVSP+PE+ I + ED+ I+
Sbjct: 181 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRA-EEDEFII 239
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADL 851
LACDG+WDVM+N+EL EF+ R + DL
Sbjct: 240 LACDGIWDVMSNEELCEFVKSRLEVSDDL 268
>sp|P36993|PP2CB_MOUSE Protein phosphatase 2C beta isoform (PP2C-beta) (IA) (Protein
phosphatase 1B)
Length = 390
Score = 294 bits (753), Expect = 2e-79
Identities = 143/269 (53%), Positives = 189/269 (70%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MGAFL+KPKTEK + G L YGLS+MQGWR++MEDAHT+++ + +W++F VYD
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNGLRYGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYD 60
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GHAGS V+ CS LL I +F+ + +E VK GIR GFL +D+ +
Sbjct: 61 GHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRNF 120
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
++ NG D+SGST + V ++P ++ F NCGDSR VL RN V F T+DHKP NP E++RI
Sbjct: 121 SDLRNGMDRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERI 180
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
AGG+VMIQR+NGSLAVSR+LGD+DYK V+ KGPTEQLVSP+PE+ I + ED+ +V
Sbjct: 181 QNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRA-EEDEFVV 239
Query: 765 LACDGVWDVMTNDELGEFLIHRCQRVADL 851
LACDG+WDVM+N+EL EF+ R + DL
Sbjct: 240 LACDGIWDVMSNEELCEFVKSRLEVSDDL 268
>sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F11.1 (PP2C)
Length = 356
Score = 182 bits (463), Expect = 8e-46
Identities = 108/259 (41%), Positives = 148/259 (57%)
Frame = +3
Query: 45 MGAFLEKPKTEKTSHLERGTNLSYGLSAMQGWRIDMEDAHTSILSLQPPFKSWAYFGVYD 224
MG L +P T+K S N G S MQGWR+DMEDAHT +LSL P A+F VYD
Sbjct: 1 MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSL-PDDPKCAFFAVYD 59
Query: 225 GHAGSSVSEICSQKLLPSILNTPEFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQS 404
GH GS VS+ L ++ EF + GN +K+ I GFL+LD+ +
Sbjct: 60 GHGGSKVSQYSGINLHKKVVAQKEFSE------GN------MKEAIEKGFLELDQQMRVD 107
Query: 405 HEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRI 584
E + +D SG+T + V I V N GDSR V + DHKP + E RI
Sbjct: 108 EETK--DDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRI 165
Query: 585 MKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIV 764
+ AGG V R+NG+LA+SR+LGDF +K +TK EQ+V+ P++ + +K+ + + IV
Sbjct: 166 IAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVTAFPDV-ITDKLTPDHEFIV 224
Query: 765 LACDGVWDVMTNDELGEFL 821
LACDG+WDVMTN E+ +F+
Sbjct: 225 LACDGIWDVMTNQEVVDFV 243
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,656,344
Number of Sequences: 369166
Number of extensions: 2003605
Number of successful extensions: 5217
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5125
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)