Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_G22
(911 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 446 e-125
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 418 e-116
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 417 e-116
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 417 e-116
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 417 e-116
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 416 e-116
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 415 e-116
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 415 e-115
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 414 e-115
sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammon... 407 e-113
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 446 bits (1148), Expect = e-125
Identities = 200/287 (69%), Positives = 234/287 (81%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK +L RYL L PD++ Q MYIW+DGTGENLRSKTRTLNF P P ++PIWNFDGSSTG
Sbjct: 6 NKTVLDRYLRLDIPDQKCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTG 65
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
QAE SNSD+YL+PVA++ DPFR +NK+VLCETY Y++ P D+N R C E M A D H
Sbjct: 66 QAERSNSDVYLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVMTRAADQH 125
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTLLDID +P WPK G+PG QGPYYCGVG N+V+GRD++EAHY+ACL AGI
Sbjct: 126 PWFGMEQEYTLLDIDKHPLGWPKNGYPGPQGPYYCGVGANRVYGRDVVEAHYRACLCAGI 185
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
I+G NA+VMPAQWEFQ+GPCEGI + D LWMARYLLHRVAEDF VVV+ DPKPI GDWN
Sbjct: 186 NISGENAKVMPAQWEFQVGPCEGITMGDDLWMARYLLHRVAEDFDVVVTLDPKPIPGDWN 245
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR P GI IE AI+K+SK H +HI+AYDPH G+D
Sbjct: 246 GAGMHTNFSTEAMRGPNGILEIESAIDKLSKVHEKHIKAYDPHAGKD 292
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 418 bits (1074), Expect = e-116
Identities = 189/287 (65%), Positives = 225/287 (78%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
+K + Y+ LP E+VQ MYIWIDGTGE+LR KTRTL+ P +D+P WNFDGSST
Sbjct: 10 SKAIKHMYMKLPQ-GEKVQAMYIWIDGTGEHLRCKTRTLDHEPKSLEDLPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
QAEGSNSD+YL P A+F DPFR NK+VLCE + Y++ D+NLRH+C M + H
Sbjct: 69 QAEGSNSDMYLRPAAMFRDPFRKDPNKLVLCEVFKYNRQSADTNLRHTCRRIMDMVSNQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTLL D +PF WP FPG QGPYYCGVG +K +GRDI+EAHY+ACL+AG+
Sbjct: 129 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGV 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KI GTNAEVMPAQWEFQ+GPCEGI + DHLW+AR++LHRV EDFGV+VSFDPKPI G+WN
Sbjct: 189 KIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR GG+K+IEEAIEK+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKNMREDGGLKHIEEAIEKLSKRHQYHIRAYDPKGGLD 295
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 417 bits (1071), Expect = e-116
Identities = 183/289 (63%), Positives = 228/289 (78%)
Frame = +2
Query: 5 RENKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSS 184
R NK +L RYL+LP + VQ Y+WIDGTGE+LR K RTL+F+P PK++P+WN+DGSS
Sbjct: 13 RINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSS 72
Query: 185 TGQAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAED 364
QAEGSNSD YL+PVA++ DPFR +N +V+C+TY +D TP D+N R +C E
Sbjct: 73 CYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAA 132
Query: 365 YHPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFA 544
PWFGIEQEYT LD D +P WPK GFPG QGPYYCGVG NKV+ RDI++AHY+ACL+A
Sbjct: 133 EEPWFGIEQEYTFLDFDGHPLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYA 192
Query: 545 GIKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGD 724
GIK++GTNAEVMPAQWEFQ+GPCEGI++ D LWMAR+LLHR++E+FG+V + DPKP+ GD
Sbjct: 193 GIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGD 252
Query: 725 WNGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
WNGAGAHTN ST MR GGI+ IE+A+ K+SK H HI AYDP +G+D
Sbjct: 253 WNGAGAHTNVSTKAMREDGGIRDIEKAVAKLSKCHERHIRAYDPKQGQD 301
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 417 bits (1071), Expect = e-116
Identities = 186/287 (64%), Positives = 227/287 (79%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
Q+EGSNSD+YL PVA+F DPFR + NK+V CE + Y++ P ++NLRHSC+ M + H
Sbjct: 69 QSEGSNSDMYLSPVAMFRDPFRKEPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSNQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AG+
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGV 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WN
Sbjct: 189 KITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR G+KYIEEAI+K+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKAMREENGLKYIEEAIDKLSKRHQYHIRAYDPKGGLD 295
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 417 bits (1071), Expect = e-116
Identities = 186/287 (64%), Positives = 227/287 (79%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
Q+EGSNSD+YLHPVA+F DPFR NK+VLCE + Y++ P ++NLRH C+ M + H
Sbjct: 69 QSEGSNSDMYLHPVAMFRDPFRRDPNKLVLCEVFKYNRKPAETNLRHICKRIMDMVSNQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AG+
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGV 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WN
Sbjct: 189 KITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIATFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR G+K+IEEAI+K+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKAMREENGLKWIEEAIDKLSKRHQYHIRAYDPKGGLD 295
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 416 bits (1070), Expect = e-116
Identities = 186/287 (64%), Positives = 226/287 (78%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y+NLP E++Q+MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMNLPQ-GEKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
Q+EGSNSD+YLHPVA+F DPFR NK+V CE + Y++ P ++NLRHSC+ M H
Sbjct: 69 QSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSSQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AGI
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGI 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KI GTNAEVMPAQWEFQIGPCEGI + DHLW+AR++LHRV EDFGV+ +FDPKPI G+WN
Sbjct: 189 KITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR G++ IEEAI+K+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLD 295
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 415 bits (1067), Expect = e-116
Identities = 187/287 (65%), Positives = 228/287 (79%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTL 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
Q+EGSNSD+YL P A+F DPFR NK+VLCE + Y++ P ++NLRH+C+ M + H
Sbjct: 69 QSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG ++ +GRDI+EAHY+ACL+AG+
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGV 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WN
Sbjct: 189 KIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLD 295
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 415 bits (1066), Expect = e-115
Identities = 187/287 (65%), Positives = 227/287 (79%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
Q+EGSNSD+YL P A+F DPFR NK+V CE + Y++ P ++NLRH+C+ M + H
Sbjct: 69 QSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AGI
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGI 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WN
Sbjct: 189 KIAGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR G+KYIEE+IEK+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKAMREENGLKYIEESIEKLSKRHQYHIRAYDPKGGLD 295
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 414 bits (1063), Expect = e-115
Identities = 187/287 (65%), Positives = 226/287 (78%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCIEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYH 370
Q+EGSNSD+YL P A+F DPFR NK+V CE + Y++ P ++NLRH+C+ M + H
Sbjct: 69 QSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQH 128
Query: 371 PWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAGI 550
PWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG +K +GRDI+EAHY+ACL+AGI
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGI 188
Query: 551 KIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDWN 730
KI GTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+WN
Sbjct: 189 KIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWN 248
Query: 731 GAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
GAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP G D
Sbjct: 249 GAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLD 295
>sp|Q4R7U3|GLNA_MACFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 374
Score = 407 bits (1047), Expect = e-113
Identities = 186/288 (64%), Positives = 227/288 (78%), Gaps = 1/288 (0%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTL 68
Query: 191 QAEGSNSDIYLHPVALFNDPFRGKDNKMVLCETYTYD-QTPHDSNLRHSCEEAMKAAEDY 367
Q+EGSNSD+YL P A+F DPFR NK+VLCE++ + P ++NLRH+C+ M +
Sbjct: 69 QSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCESFQVQFEGPAETNLRHTCKRIMDMVSNQ 128
Query: 368 HPWFGIEQEYTLLDIDLYPFSWPKLGFPGAQGPYYCGVGCNKVFGRDIIEAHYKACLFAG 547
HPWFG+EQEYTL+ D +PF WP GFPG QGPYYCGVG ++ +GRDI+EAHY+ACL+AG
Sbjct: 129 HPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAG 188
Query: 548 IKIAGTNAEVMPAQWEFQIGPCEGINVSDHLWMARYLLHRVAEDFGVVVSFDPKPIAGDW 727
+KIAGTNAEVMPAQWEFQIGPCEGI++ DHLW+AR++LHRV EDFGV+ +FDPKPI G+W
Sbjct: 189 VKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNW 248
Query: 728 NGAGAHTNYSTIQMRSPGGIKYIEEAIEKMSKRHHEHIEAYDPHKGED 871
NGAG HTN+ST MR G+KYIEEAIEK+SKRH HI AYDP G D
Sbjct: 249 NGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLD 296
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,961,167
Number of Sequences: 369166
Number of extensions: 2427525
Number of successful extensions: 6972
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6853
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9270587090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)