Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_G13
(878 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UBQ7|GRHPR_HUMAN Glyoxylate reductase/hydroxypyruvate ... 144 3e-34
sp|Q91Z53|GRHPR_MOUSE Glyoxylate reductase/hydroxypyruvate ... 135 1e-31
sp|Q9UYR1|GYAR_PYRAB Glyoxylate reductase (Glycolate reduct... 117 6e-26
sp|Q9C4M5|GYAR_THELI Glyoxylate reductase (Glycolate reduct... 110 5e-24
sp|Q8U3Y2|GYAR_PYRFU Glyoxylate reductase (Glycolate reduct... 110 7e-24
sp|Q5JEZ2|GYAR_PYRKO Glyoxylate reductase (Glycolate reduct... 106 1e-22
sp|Q9YAW4|GYAR_AERPE Glyoxylate reductase (Glycolate reduct... 105 2e-22
sp|O58320|GYAR_PYRHO Glyoxylate reductase (Glycolate reduct... 104 3e-22
sp|P36234|DHGY_HYPME Glycerate dehydrogenase (NADH-dependen... 101 2e-21
sp|P58000|TKRA_ENTAG 2-ketogluconate reductase (2KR) (2-ket... 93 1e-18
>sp|Q9UBQ7|GRHPR_HUMAN Glyoxylate reductase/hydroxypyruvate reductase
Length = 328
Score = 144 bits (363), Expect = 3e-34
Identities = 73/163 (44%), Positives = 102/163 (62%), Gaps = 2/163 (1%)
Frame = +1
Query: 4 LRKMKVFVTRRFPHDAIESIKKAG-FSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKI 180
+R MKVFVTRR P + ++ +A ++ W+SD+ + + + GLLC LSD +
Sbjct: 4 VRLMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHV 63
Query: 181 VETFINST-KNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVS 357
+ +++ NLK+I TMSVG H+ + KK I++GYTP L D AELA+ LLLT
Sbjct: 64 DKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTC 123
Query: 358 RRLLEGMNAVKHGGWTTWKPFWLCGVELRNSVVGVVGFGNIGR 486
RRL E + VK+GGWT+WKP WLCG L S VG++G G IG+
Sbjct: 124 RRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQ 166
Score = 110 bits (275), Expect = 5e-24
Identities = 59/129 (45%), Positives = 78/129 (60%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASDKPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRH 670
IA+R F V+ + + + P E V EL ++DFI+VAC+L T
Sbjct: 168 IARRLKPFGVQRFLYTGRQPRPEEAA---EFQAEFVSTPELAAQSDFIVVACSLTPATEG 224
Query: 671 LFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLK 850
L N+ F KMK+ A+ +NISRG V++QD L +AL +IA AGLDV PEPLPT+H LL
Sbjct: 225 LCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLT 284
Query: 851 LSNCIILPH 877
L NC+ILPH
Sbjct: 285 LKNCVILPH 293
>sp|Q91Z53|GRHPR_MOUSE Glyoxylate reductase/hydroxypyruvate reductase
Length = 328
Score = 135 bits (341), Expect = 1e-31
Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 2/162 (1%)
Frame = +1
Query: 7 RKMKVFVTRRFPHDAIESIKKAG-FSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIV 183
R MKVFVT P + ++ +A ++ W SD + + + + GLLC LSD++
Sbjct: 5 RLMKVFVTGPLPAEGRAALAQAADCEVEQWNSDDPIPRKDLEQGVVGAHGLLCRLSDRVD 64
Query: 184 ETFINST-KNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSR 360
+ +++ NL++I T+SVG H+ + KK I++GYTPG L DA AELA+ LLLT R
Sbjct: 65 KKLLDAAGANLRVISTLSVGVDHLALDEIKKRGIRVGYTPGVLTDATAELAVSLLLTTCR 124
Query: 361 RLLEGMNAVKHGGWTTWKPFWLCGVELRNSVVGVVGFGNIGR 486
RL E + VK+GGW++W P W+CG L S VG+VG G IG+
Sbjct: 125 RLPEAIEEVKNGGWSSWSPLWMCGYGLSQSTVGIVGLGRIGQ 166
Score = 105 bits (261), Expect = 2e-22
Identities = 56/129 (43%), Positives = 76/129 (58%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASDKPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRH 670
IA+R F V+ + + + P E VP +L ++DFI+V+C+L T
Sbjct: 168 IARRLKPFGVQRFLYTGRQPRPQEAA---EFQAEFVPIAQLAAESDFIVVSCSLTPDTMG 224
Query: 671 LFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLK 850
L ++ F KMK AI +NISRG V++Q+ L +AL +IA AGLDV PEPLP H LL
Sbjct: 225 LCSKDFFQKMKNTAIFINISRGDVVNQEDLYQALASGQIAAAGLDVTTPEPLPPSHPLLT 284
Query: 851 LSNCIILPH 877
L NC+ILPH
Sbjct: 285 LKNCVILPH 293
>sp|Q9UYR1|GYAR_PYRAB Glyoxylate reductase (Glycolate reductase)
Length = 335
Score = 117 bits (292), Expect = 6e-26
Identities = 60/178 (33%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Frame = +1
Query: 4 LRKMKVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIV 183
+ K +VF+TR P IE ++K F +++WE ++++ + + E KDVD L+ LS++I
Sbjct: 1 MSKPRVFITREIPEVGIEMLEKE-FEVEVWEDEREIpreILLEKVKDVDALVTMLSERID 59
Query: 184 ETFINSTKNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSRR 363
L+++ +VG+ +ID E A K I + TPG L DA A+LA LLL +R
Sbjct: 60 REVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARH 119
Query: 364 LLEGMNAVKHGGW----TTWKPFWLCGVELRNSVVGVVGFGNIGRRNCKTCSCFQCEI 525
L++G + G W W P W G ++ +G++GFG IG+ K F I
Sbjct: 120 LVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRI 177
Score = 97.4 bits (241), Expect = 5e-20
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 2/131 (1%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASD--KPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKT 664
IAKRA F+++ + S KP E+E + P +ELL ++DF+++A LN++T
Sbjct: 166 IAKRARGFDMRILYYSRTRKP------EVEKELNAEFKPLDELLRESDFVVLAVPLNKET 219
Query: 665 RHLFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDL 844
H+ NE MK+ AIL+N++RG VID AL+KAL E IAGAGLDV EP + +L
Sbjct: 220 YHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPY-YNEEL 278
Query: 845 LKLSNCIILPH 877
L N ++ PH
Sbjct: 279 FSLDNVVLTPH 289
>sp|Q9C4M5|GYAR_THELI Glyoxylate reductase (Glycolate reductase)
Length = 331
Score = 110 bits (275), Expect = 5e-24
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 4/176 (2%)
Frame = +1
Query: 10 KMKVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIVET 189
K KVF+TR+ P + I+ I+K + I++W+ + + E ++VD L+ ++DK+ +
Sbjct: 2 KPKVFITRQIPENGIKMIEKF-YEIELWKDPKAPPRGVLLEKVREVDALVTLVTDKVDKE 60
Query: 190 FINSTKNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSRRLL 369
+ + LK+I +VG+ +ID E A K I + TPG L DA A+LA LLL V+RR++
Sbjct: 61 LLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIV 120
Query: 370 EGMNAVKHGGW----TTWKPFWLCGVELRNSVVGVVGFGNIGRRNCKTCSCFQCEI 525
E V+ G W W P G L+ +G+VGFG IG+ K F +I
Sbjct: 121 EADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKI 176
Score = 91.3 bits (225), Expect = 3e-18
Identities = 57/131 (43%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASD--KPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKT 664
+AKRA F +K + S KP E E + V FE LL ++DFI + L ++T
Sbjct: 165 LAKRAKGFGMKIIYYSRTRKP------EAEEEIGAEYVDFETLLKESDFISLHVPLTKET 218
Query: 665 RHLFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDL 844
H+ E MK NAIL+N SRG V+D +AL+KAL E IAGAGLDV EP + +L
Sbjct: 219 YHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPY-YNEEL 277
Query: 845 LKLSNCIILPH 877
KL N ++ PH
Sbjct: 278 FKLKNVVLAPH 288
>sp|Q8U3Y2|GYAR_PYRFU Glyoxylate reductase (Glycolate reductase)
Length = 336
Score = 110 bits (274), Expect = 7e-24
Identities = 57/176 (32%), Positives = 95/176 (53%), Gaps = 4/176 (2%)
Frame = +1
Query: 10 KMKVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIVET 189
K KVF+TR P + I +++ F +++WE ++++ + + E KDVD L+ LS++I +
Sbjct: 2 KPKVFITRAIPENGINMLEEE-FEVEVWEEEREIpreKLLEKVKDVDALVTMLSERIDQE 60
Query: 190 FINSTKNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSRRLL 369
+ L+++ +VG+ +ID E A + I + TP L +A A+ A LLL +R ++
Sbjct: 61 VFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVV 120
Query: 370 EGMNAVKHGGW----TTWKPFWLCGVELRNSVVGVVGFGNIGRRNCKTCSCFQCEI 525
+G V+ G W W P W G EL +G+VGFG IG+ + F I
Sbjct: 121 KGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRI 176
Score = 89.7 bits (221), Expect = 9e-18
Identities = 54/129 (41%), Positives = 75/129 (58%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASDKPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRH 670
IA+RA FN++ + S E E+ P EE+L ++DF+I+A L ++T +
Sbjct: 165 IARRAKGFNMRILYYSRTRKSQAEKELG----AEYRPLEEVLKESDFVILAVPLTKETMY 220
Query: 671 LFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLK 850
+ NE MK AILVNI+RG V+D AL+KAL E IAGAGLDV EP + +L
Sbjct: 221 MINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPY-YNEELFS 279
Query: 851 LSNCIILPH 877
L N ++ PH
Sbjct: 280 LDNVVLTPH 288
>sp|Q5JEZ2|GYAR_PYRKO Glyoxylate reductase (Glycolate reductase)
Length = 333
Score = 106 bits (264), Expect = 1e-22
Identities = 53/161 (32%), Positives = 91/161 (56%), Gaps = 4/161 (2%)
Frame = +1
Query: 16 KVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIVETFI 195
KVF+TR P + IE +K+ F +++W ++++ + + + +DVD L+ LS++I
Sbjct: 4 KVFITRAIPENGIEMLKEH-FEVEVWPEEREIpreVLLKKVRDVDALVTMLSERIDSEVF 62
Query: 196 NSTKNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSRRLLEG 375
++ L+++ +VG+ +ID E A + I + TP L DA A+ A LLL +RRL+E
Sbjct: 63 DAAPRLRIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEA 122
Query: 376 MNAVKHGGW----TTWKPFWLCGVELRNSVVGVVGFGNIGR 486
+ + G W W P W G ++ +G+VGFG IG+
Sbjct: 123 DHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQ 163
Score = 88.6 bits (218), Expect = 2e-17
Identities = 53/131 (40%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Frame = +2
Query: 491 IAKRAHAFNVKSVI--ASDKPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKT 664
+A+RA F ++ + S KP E E + E+LL ++DF+++A L ++T
Sbjct: 165 VARRARGFGMRILYYSRSRKP------EAEKELGAEFRSLEDLLRESDFVVLAVPLTKET 218
Query: 665 RHLFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDL 844
+++ NE MKK AILVNI+RG V+D AL+KAL E IAGAGLDV EP + +L
Sbjct: 219 QYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPY-YNEEL 277
Query: 845 LKLSNCIILPH 877
L N ++ PH
Sbjct: 278 FSLKNVVLAPH 288
>sp|Q9YAW4|GYAR_AERPE Glyoxylate reductase (Glycolate reductase)
Length = 335
Score = 105 bits (262), Expect = 2e-22
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 4/178 (2%)
Frame = +1
Query: 4 LRKMKVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIV 183
+++ +VFVTR +A+E + K + +++W+ Q Y+ + +++ D L L+D+I
Sbjct: 1 MKRPRVFVTREVFPEALELLSKY-YDVEVWDKYQPPPYETLLSKAREADALYTLLTDRID 59
Query: 184 ETFINSTKNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSRR 363
++ L+++ M+VGF +ID E A + I + TPG L +A AE L+L +RR
Sbjct: 60 CDLLSQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARR 119
Query: 364 LLEGMNAVKHGGW----TTWKPFWLCGVELRNSVVGVVGFGNIGRRNCKTCSCFQCEI 525
++E + V+ G W T W P + GVELR +G++G G IG R + F I
Sbjct: 120 VVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRI 177
Score = 82.4 bits (202), Expect = 2e-15
Identities = 44/104 (42%), Positives = 59/104 (56%)
Frame = +2
Query: 566 EIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRHLFNEAAFAKMKKNAILVNISRGPVI 745
EIE + E+LL ++D + + L ++TRHL E+ MKK AILVN RG ++
Sbjct: 187 EIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVNTGRGAIV 246
Query: 746 DQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLKLSNCIILPH 877
D AL+KAL E IA A LDV EPL +H L N ++ PH
Sbjct: 247 DTGALVKALREGWIAAAALDVFEEEPLNPNHPLTAFKNVVLAPH 290
>sp|O58320|GYAR_PYRHO Glyoxylate reductase (Glycolate reductase)
Length = 334
Score = 104 bits (260), Expect = 3e-22
Identities = 54/176 (30%), Positives = 93/176 (52%), Gaps = 4/176 (2%)
Frame = +1
Query: 10 KMKVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIVET 189
K KVF+TR P I+ ++ F +++W ++++ + + + K+VD L+ LS++I +
Sbjct: 2 KPKVFITREIPEVGIKMLEDE-FEVEVWGDEKEIpreILLKKVKEVDALVTMLSERIDKE 60
Query: 190 FINSTKNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSRRLL 369
+ L+++ +VG+ +ID E A K I + TP L DA A+LA LLL +R ++
Sbjct: 61 VFENAPKLRIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVV 120
Query: 370 EGMNAVKHGGW----TTWKPFWLCGVELRNSVVGVVGFGNIGRRNCKTCSCFQCEI 525
+G V+ G W W P W G ++ +G++G G IG+ K F I
Sbjct: 121 KGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRI 176
Score = 99.4 bits (246), Expect = 1e-20
Identities = 57/129 (44%), Positives = 79/129 (61%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASDKPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRH 670
IAKRA FN++ + S + E+E + P E+LL ++DF+++A L +T H
Sbjct: 165 IAKRAKGFNMRILYYSRT----RKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYH 220
Query: 671 LFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLK 850
L NE MKK AIL+NI+RG V+D +AL+KAL E IAGAGLDV EP + +L K
Sbjct: 221 LINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPY-YNEELFK 279
Query: 851 LSNCIILPH 877
L N ++ PH
Sbjct: 280 LDNVVLTPH 288
>sp|P36234|DHGY_HYPME Glycerate dehydrogenase (NADH-dependent hydroxypyruvate reductase)
(HPR) (GDH) (Hydroxypyruvate dehydrogenase) (Glyoxylate
reductase)
Length = 322
Score = 101 bits (252), Expect = 2e-21
Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Frame = +1
Query: 4 LRKMKVFVTRRFPHDAIESIKKAGFSIDMWESDQQVDYQYMTEHSKDVDGLLCTLSDKIV 183
+ K K+ +T P A+ +++ + + D ++ M E +K VD LL TL++K
Sbjct: 1 MSKKKILITWPLPEAAMARARES-YDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCR 59
Query: 184 ETFINST-KNLKLIVTMSVGFVHIDTEAAKK*NIKIGYTPGDLGDAIAELAIGLLLTVSR 360
+ I+ +N+K I T S+GF HID +A K IK+G P + A AE+A+ LLL +R
Sbjct: 60 KEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSAR 119
Query: 361 RLLEGMNAVKHGGWTTWKPFWLCGVELRNSVVGVVGFGNIGRRNCKTCSCFQCEISH 531
R EG ++ W W+P L G +L N +G+ GFG+IG+ K F +I +
Sbjct: 120 RAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDY 176
Score = 53.5 bits (127), Expect = 7e-07
Identities = 37/129 (28%), Positives = 60/129 (46%)
Frame = +2
Query: 491 IAKRAHAFNVKSVIASDKPGGPTEIEIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRH 670
+AKRA F++ + D + E H + LL + F + +TR+
Sbjct: 163 LAKRAQGFDM-DIDYFDTHRASSSDEASYQATFHD-SLDSLLSVSQFFSLNAPSTPETRY 220
Query: 671 LFNEAAFAKMKKNAILVNISRGPVIDQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLK 850
FN+A + + AI+VN +RG ++D + ++ AL R+A AG DV EP +
Sbjct: 221 FFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEP-NINEGYYD 279
Query: 851 LSNCIILPH 877
L N + PH
Sbjct: 280 LPNTFLFPH 288
>sp|P58000|TKRA_ENTAG 2-ketogluconate reductase (2KR) (2-ketoaldonate reductase)
Length = 323
Score = 92.8 bits (229), Expect = 1e-18
Identities = 46/104 (44%), Positives = 62/104 (59%)
Frame = +2
Query: 566 EIEPNVVVHIVPFEELLGKADFIIVACTLNEKTRHLFNEAAFAKMKKNAILVNISRGPVI 745
E E + LL ++DF+ ++ L E+T H+ AKMK +AIL+N RGPV+
Sbjct: 181 EAESRFNAQYCDLDTLLRESDFLCISLPLTEQTHHMIGREQLAKMKPSAILINAGRGPVV 240
Query: 746 DQDALLKALTEKRIAGAGLDVCYPEPLPTDHDLLKLSNCIILPH 877
D+ AL+ AL +K I AGLDV EPLP D +LL L N + LPH
Sbjct: 241 DEQALIAALKDKTIHAAGLDVFEQEPLPVDSELLTLPNVVALPH 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,325,243
Number of Sequences: 369166
Number of extensions: 1852446
Number of successful extensions: 5171
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5110
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)