Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_E12
(709 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P00432|CATA_BOVIN Catalase 194 1e-49
sp|P04762|CATA_RAT Catalase 189 5e-48
sp|Q9PWF7|CATA_RANRU Catalase 187 2e-47
sp|P24270|CATA_MOUSE Catalase 186 4e-47
sp|P04040|CATA_HUMAN Catalase 186 5e-47
sp|Q64405|CATA_CAVPO Catalase 186 7e-47
sp|O62839|CATA_PIG Catalase 184 2e-46
sp|P17336|CATA_DROME Catalase 184 3e-46
sp|Q9PT92|CATA_BRARE Catalase 183 3e-46
sp|O97492|CATA_CANFA Catalase 182 6e-46
>sp|P00432|CATA_BOVIN Catalase
Length = 506
Score = 194 bits (494), Expect = 1e-49
Identities = 95/185 (51%), Positives = 128/185 (69%), Gaps = 4/185 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQLAF P+NM PGIEPSPD+MLQGRLF+Y DT RHRLG N+ IPVN
Sbjct: 317 LNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN- 375
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP+R NY+ DGPM + DN G PNYYPNS+ PEH P LE R +GD+ RF++
Sbjct: 376 --CPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEHQPSALEHRTHFSGDVQRFNS 433
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVHQQLSRDIL 587
+++DN +QV FY KVL+++ + RL NIA L + I+ +A+ NF+ VH + I
Sbjct: 434 ANDDNVTQVRTFYLKVLNEEQRKRLCENIAGHLKDAQLFIQKKAVKNFSDVHPEYGSRIQ 493
Query: 588 MYMEQ 602
+++
Sbjct: 494 ALLDK 498
Score = 38.5 bits (88), Expect = 0.018
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP+NYF E+EQ
Sbjct: 309 LIPVGKLVLNRNPVNYFAEVEQ 330
>sp|P04762|CATA_RAT Catalase
Length = 527
Score = 189 bits (481), Expect = 5e-48
Identities = 93/185 (50%), Positives = 123/185 (66%), Gaps = 4/185 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP NYF E+EQ+AF P+NM PGIEPSPD+MLQGRLF+Y DT RHRLG N+ IPVN
Sbjct: 318 LNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP+R NY+ DGPM + DN G PNYYPNS+ PE LE + D+ RF++
Sbjct: 377 --CPYRARVANYQRDGPMCMHDNQGGAPNYYPNSFSAPEQQGSALEHHSQCSADVKRFNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVHQQLSRDIL 587
++EDN +QV FYTKVL+++ + RL NIA L + I+ +A+ NFT VH +
Sbjct: 435 ANEDNVTQVRTFYTKVLNEEERKRLCENIANHLKDAQLFIQRKAVKNFTDVHPDYGARVQ 494
Query: 588 MYMEQ 602
++Q
Sbjct: 495 ALLDQ 499
Score = 37.0 bits (84), Expect = 0.052
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP NYF E+EQ
Sbjct: 310 LIPVGKLVLNRNPANYFAEVEQ 331
>sp|Q9PWF7|CATA_RANRU Catalase
Length = 528
Score = 187 bits (476), Expect = 2e-47
Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 4/172 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP NYF E+EQ+AF P+NM PGIEPSPD+MLQGRLFSY DT RHRLG N+ +PVN
Sbjct: 318 LNRNPANYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP++ NY+ DGPM DN G PNY+PNS+ PE+ P E + + D++R+++
Sbjct: 377 --CPYKARVANYQRDGPMCFSDNQGGAPNYFPNSFSAPENQPAARESKFRVSADVARYNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVH 563
SD+DN SQV FYTKVL ++ + RL NIA L + I+ RA+ NFT VH
Sbjct: 435 SDDDNVSQVRDFYTKVLSEEERKRLCENIAGHLKGAQIFIQKRAVKNFTDVH 486
Score = 37.0 bits (84), Expect = 0.052
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP NYF E+EQ
Sbjct: 310 LIPVGKLVLNRNPANYFAEVEQ 331
>sp|P24270|CATA_MOUSE Catalase
Length = 527
Score = 186 bits (473), Expect = 4e-47
Identities = 92/172 (53%), Positives = 119/172 (69%), Gaps = 4/172 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQ+AF P+NM PGIEPSPD+MLQGRLF+Y DT RHRLG N+ IPVN
Sbjct: 318 LNKNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP+R NY+ DGPM + DN G PNYYPNS+ PE LE D+ RF++
Sbjct: 377 --CPYRARVANYQRDGPMCMHDNQGGAPNYYPNSFSAPEQQRSALEHSVQCAVDVKRFNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVH 563
++EDN +QV FYTKVL+++ + RL NIA L + I+ +A+ NFT VH
Sbjct: 435 ANEDNVTQVRTFYTKVLNEEERKRLCENIAGHLKDAQLFIQKKAVKNFTDVH 486
Score = 39.7 bits (91), Expect = 0.008
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLNKNP+NYF E+EQ
Sbjct: 310 LIPVGKLVLNKNPVNYFAEVEQ 331
>sp|P04040|CATA_HUMAN Catalase
Length = 527
Score = 186 bits (472), Expect = 5e-47
Identities = 91/185 (49%), Positives = 124/185 (67%), Gaps = 4/185 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQ+AF P+NM PGIE SPD+MLQGRLF+Y DT RHRLG N+ IPVN
Sbjct: 318 LNRNPVNYFAEVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP+R NY+ DGPM + DN G PNYYPNS+G PE P LE +G++ RF+
Sbjct: 377 --CPYRARVANYQRDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNT 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVHQQLSRDIL 587
+++DN +QV FY VL+++ + RL NIA L + I+ +A+ NFT+VH I
Sbjct: 435 ANDDNVTQVRAFYVNVLNEEQRKRLCENIAGHLKDAQIFIQKKAVKNFTEVHPDYGSHIQ 494
Query: 588 MYMEQ 602
+++
Sbjct: 495 ALLDK 499
Score = 38.5 bits (88), Expect = 0.018
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP+NYF E+EQ
Sbjct: 310 LIPVGKLVLNRNPVNYFAEVEQ 331
>sp|Q64405|CATA_CAVPO Catalase
Length = 527
Score = 186 bits (471), Expect = 7e-47
Identities = 91/185 (49%), Positives = 124/185 (67%), Gaps = 4/185 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQ+AF P+NM PGIEPSPD+MLQGRLF+Y DT RHRLG N+ IPVN
Sbjct: 318 LNRNPVNYFAEVEQIAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP+R NY+ DGPM V DN G PNYYPNS+ P + LE +GD+ R+++
Sbjct: 377 --CPYRTRVANYQRDGPMCVTDNQGGAPNYYPNSFSAPVEQRQALEHTSRCSGDVGRYNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVHQQLSRDIL 587
+D+DN +QV FYT+VL+++ + RL NIA L + I+ +A+ NF VH I
Sbjct: 435 TDDDNVTQVRAFYTQVLNEEQRRRLCENIAGHLKDAQLFIQKKAVKNFMDVHPDYGNRIQ 494
Query: 588 MYMEQ 602
+++
Sbjct: 495 TLLDK 499
Score = 38.5 bits (88), Expect = 0.018
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP+NYF E+EQ
Sbjct: 310 LIPVGKLVLNRNPVNYFAEVEQ 331
>sp|O62839|CATA_PIG Catalase
Length = 503
Score = 184 bits (467), Expect = 2e-46
Identities = 91/172 (52%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQ+AF P+NM PGIEPSPD+MLQGRLF Y DT RHRLG N+ IPVN
Sbjct: 318 LNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFGYPDTHRHRLGANYLQIPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CPFR NY+ DGPM DN G PNYYPNS+ PE LE +GD+ RF++
Sbjct: 377 --CPFRARVANYQRDGPMCFQDNQGGAPNYYPNSFSAPEQTHSALEHCTRYSGDVQRFNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVH 563
++EDN +QV FY VL+++ + RL NIA L + I+ +A+ NF+ VH
Sbjct: 435 ANEDNVTQVRTFYLNVLNEEERKRLCENIAGHLKDAQLFIQKKAVKNFSDVH 486
Score = 38.5 bits (88), Expect = 0.018
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP+NYF E+EQ
Sbjct: 310 LIPVGKLVLNRNPVNYFAEVEQ 331
>sp|P17336|CATA_DROME Catalase
Length = 506
Score = 184 bits (466), Expect = 3e-46
Identities = 92/177 (51%), Positives = 118/177 (66%), Gaps = 4/177 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
LD+NP NYF E+EQ+AF PA+++PG+EPSPD+ML GRLFSY DT RHRLG N+ IPVN
Sbjct: 316 LDRNPKNYFAEVEQIAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNC 375
Query: 240 P-RCPFRNYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNP--KFLECREPSTGDISRFDNS 410
P + N++ DG M V DN PNY+PNS+ GP+ P + L P TGD+ R+ +
Sbjct: 376 PYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFNGPQECPRARALSSCCPVTGDVYRYSSG 435
Query: 411 D-EDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVHQQLSR 578
D EDN QVT F+ VLDK AK RL +NIA L + ++ RA+ NFT+VH R
Sbjct: 436 DTEDNFGQVTDFWVHVLDKCAKKRLVQNIAGHLSNASQFLQERAVKNFTQVHADFGR 492
Score = 33.5 bits (75), Expect = 0.57
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG++VL++NP NYF E+EQ
Sbjct: 308 LIPVGKMVLDRNPKNYFAEVEQ 329
>sp|Q9PT92|CATA_BRARE Catalase
Length = 526
Score = 183 bits (465), Expect = 3e-46
Identities = 90/197 (45%), Positives = 129/197 (65%), Gaps = 4/197 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQLAF P+NM PGIEPSPD+MLQGRLFSY DT RHRLG N+ +PVN
Sbjct: 318 LNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFSYPDTHRHRLGANYLQLPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CP+R NY+ DGPM + DN G PNYYPNS+ P+ P+FLE + + D++R+++
Sbjct: 377 --CPYRTRVANYQRDGPMCMHDNQGGAPNYYPNSFSAPDVQPRFLESKCKVSPDVARYNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVHQQLSRDIL 587
+D+DN +QV F+T+VL++ + RL +N+A L + I+ R + N VH +
Sbjct: 435 ADDDNVTQVRTFFTQVLNEAERERLCQNMAGHLKGAQLFIQKRMVQNLMAVHSDYGNRVQ 494
Query: 588 MYMEQDLGVKTNLTCHL 638
+++ T H+
Sbjct: 495 ALLDKHNAEGKKNTVHV 511
Score = 37.0 bits (84), Expect = 0.052
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+ VLN+NP+NYF E+EQ
Sbjct: 310 LIPVGRFVLNRNPVNYFAEVEQ 331
>sp|O97492|CATA_CANFA Catalase
Length = 527
Score = 182 bits (463), Expect = 6e-46
Identities = 91/172 (52%), Positives = 118/172 (68%), Gaps = 4/172 (2%)
Frame = +3
Query: 60 LDQNPINYFMEMEQLAFCPANMIPGIEPSPDRMLQGRLFSYRDTQRHRLGTNFHLIPVNK 239
L++NP+NYF E+EQ+AF P+NM PGIEPSPD+MLQGRLF+Y DT RHRLG N+ IPVN
Sbjct: 318 LNRNPVNYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN- 376
Query: 240 PRCPFR----NYEMDGPMRVDDNNGNRPNYYPNSYGGPEHNPKFLECREPSTGDISRFDN 407
CPFR NY+ DGPM + DN G PNYYPNS+ PE LE + D+ RF++
Sbjct: 377 --CPFRARVANYQRDGPMCMLDNQGGAPNYYPNSFSAPEQQRCVLEHSSQCSPDVQRFNS 434
Query: 408 SDEDNHSQVTIFYTKVLDKDAKLRLARNIAESLGQCKEVIRARAINNFTKVH 563
++EDN +QV FY KVL ++ + RL NIA L + I+ +A+ NF+ VH
Sbjct: 435 ANEDNVTQVRTFYLKVLGEEERKRLCENIAGHLKDAQLFIQKKAVKNFSDVH 486
Score = 38.5 bits (88), Expect = 0.018
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = -3
Query: 68 LIEVGQLVLNKNPINYFMEMEQ 3
LI VG+LVLN+NP+NYF E+EQ
Sbjct: 310 LIPVGKLVLNRNPVNYFAEVEQ 331
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,296,467
Number of Sequences: 369166
Number of extensions: 1675663
Number of successful extensions: 3806
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3740
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6219306880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)