Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_001_C24
(889 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P92176|ACT2_LUMTE Actin-2 495 e-140
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 494 e-139
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 494 e-139
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 494 e-139
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 494 e-139
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 494 e-139
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 493 e-139
sp|P92182|ACT1_LUMTE Actin-1 493 e-139
sp|Q26065|ACT_PLAMG Actin, adductor muscle 493 e-139
sp|P10984|ACT2_CAEEL Actin-2 492 e-139
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 495 bits (1275), Expect = e-140
Identities = 244/250 (97%), Positives = 248/250 (99%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
+EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 EEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVITIG
Sbjct: 243 LPDGQVITIG 252
Score = 94.4 bits (233), Expect = 4e-19
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 494 bits (1273), Expect = e-139
Identities = 243/250 (97%), Positives = 247/250 (98%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVITIG
Sbjct: 243 LPDGQVITIG 252
Score = 96.7 bits (239), Expect = 8e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 494 bits (1272), Expect = e-139
Identities = 245/266 (92%), Positives = 252/266 (94%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 723 LPDGQVITIG**TI*MSRSSFPTKFL 800
LPDGQVITIG ++F FL
Sbjct: 243 LPDGQVITIGNERFRCPEATFQPSFL 268
Score = 95.5 bits (236), Expect = 2e-19
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 494 bits (1271), Expect = e-139
Identities = 242/250 (96%), Positives = 247/250 (98%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVITIG
Sbjct: 243 LPDGQVITIG 252
Score = 96.7 bits (239), Expect = 8e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 494 bits (1271), Expect = e-139
Identities = 242/250 (96%), Positives = 248/250 (99%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVITIG
Sbjct: 243 LPDGQVITIG 252
Score = 97.4 bits (241), Expect = 5e-20
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 494 bits (1271), Expect = e-139
Identities = 242/250 (96%), Positives = 247/250 (98%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVITIG
Sbjct: 243 LPDGQVITIG 252
Score = 96.7 bits (239), Expect = 8e-20
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 493 bits (1269), Expect = e-139
Identities = 242/250 (96%), Positives = 246/250 (98%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVITIG
Sbjct: 243 LPDGQVITIG 252
Score = 97.4 bits (241), Expect = 5e-20
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|P92182|ACT1_LUMTE Actin-1
Length = 376
Score = 493 bits (1268), Expect = e-139
Identities = 246/266 (92%), Positives = 251/266 (94%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
DE+V ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVTALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMGTAASSSSLEKSYE 242
Query: 723 LPDGQVITIG**TI*MSRSSFPTKFL 800
LPDGQVITIG S F FL
Sbjct: 243 LPDGQVITIGNERFRCPESMFQPAFL 268
Score = 94.0 bits (232), Expect = 5e-19
Identities = 40/49 (81%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPE++FQP+FLG+ES GIHETT+NSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPESMFQPAFLGMESAGIHETTFNSIMKCDVDIRKDLYAN 297
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 493 bits (1268), Expect = e-139
Identities = 246/266 (92%), Positives = 252/266 (94%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 242
Query: 723 LPDGQVITIG**TI*MSRSSFPTKFL 800
LPDGQVITIG S F FL
Sbjct: 243 LPDGQVITIGNERFRCPESLFQPSFL 268
Score = 97.4 bits (241), Expect = 5e-20
Identities = 43/49 (87%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPE+LFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 249 ITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYAN 297
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 492 bits (1267), Expect = e-139
Identities = 241/250 (96%), Positives = 247/250 (98%)
Frame = +3
Query: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 182
D+DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 183 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 362
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 363 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 542
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 543 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYE 722
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 723 LPDGQVITIG 752
LPDGQVIT+G
Sbjct: 243 LPDGQVITVG 252
Score = 96.3 bits (238), Expect = 1e-19
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +1
Query: 742 LLLGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYAN 888
+ +GNERFRCPEALFQPSFLG+ES GIHET+YNSIMKCD+DIRKDLYAN
Sbjct: 249 ITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYAN 297
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,128,540
Number of Sequences: 369166
Number of extensions: 2203543
Number of successful extensions: 7447
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7298
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)